RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 KRT78Q8N1N4 520 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 SLC25A45Q8N413 288 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 FAM181AQ8N9Y4 354 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 GPR156Q8NFN8 814 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 OR4E2Q8NGC2 313 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 ZNF483Q8TF39 744 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-220ENST00000555634 PATE1Q8WXA2 126 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 ZNF75CPQ92670 426 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-220ENST00000555634 DLG3Q92796 817 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 UBE2E3Q969T4 207 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 PYCR2Q96C36 320 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 CHMP6Q96FZ7 201 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 ZNF382Q96SR6 550 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 SIKE1Q9BRV8 207 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 TMEM79Q9BSE2 394 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 PITPNM3Q9BZ71 974 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 SMOC1Q9H4F8 434 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 IPPKQ9H8X2 491 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 IL21RQ9HBE5 538 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 MID1IP1Q9NPA3 183 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 FAM86C1Q9NVL1 165 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 LRIT1Q9P2V4 623 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 TAC3Q9UHF0 121 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 PADI4Q9UM07 663 aa10.84□□□□□ -0.67
SHMT2-220ENST00000555634 OR6C74A6NCV1 312 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 CLDN9O95484 217 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 PROS1P07225 676 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 CHRM5P08912 532 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SBK3P0C264 359 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 EBLN1P0CF75 366 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 PNLIPP16233 465 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 KCNC1P48547 511 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SF3A2Q15428 464 aaKnown RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SHBQ15464 509 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SF1Q15637 639 aaKnown RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 XKR6Q5GH73 641 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 C10orf62Q5T681 223 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 PRR23CQ6ZRP0 262 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 CPLX4Q7Z7G2 160 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 TMPRSS11BQ86T26 416 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 PLXDC1Q8IUK5 500 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SLC35F3Q8IY50 421 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 TMEM151AQ8N4L1 468 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 PPFIBP2Q8ND30 876 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 WDR48Q8TAF3 677 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 TRPC4APQ8TEL6 797 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SLC5A11Q8WWX8 675 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 GRAMD1AQ96CP6 724 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 PTCD3Q96EY7 689 aaKnown RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 ZDHHC12Q96GR4 267 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 APOLD1Q96LR9 279 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 C7orf26Q96N11 449 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 IL17FQ96PD4 163 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 CDC6Q99741 560 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 DPYSL5Q9BPU6 564 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 EFCAB11Q9BUY7 163 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 GATA5Q9BWX5 397 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SGPP1Q9BX95 441 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 EHD1Q9H4M9 534 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 XKR8Q9H6D3 395 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SYNDIG1Q9H7V2 258 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 NOL11Q9H8H0 719 aaKnown RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 MRPS30Q9NP92 439 aaKnown RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 ANKMY1Q9P2S6 941 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SNX6Q9UNH7 406 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SLC22A14Q9Y267 594 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-220ENST00000555634 RAP2CQ9Y3L5 183 aa10.83□□□□□ -0.68
SHMT2-220ENST00000555634 SNRNP200O75643 2136 aaKnown RBP10.82□□□□□ -0.68
SHMT2-220ENST00000555634 CPED1A4D0V7 1026 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 OR5K3A6NET4 321 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 TRPC5OSA6NMA1 111 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 E7ENX8 843 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 SIGLEC6O43699 453 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ESRRBO95718 433 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 LDOC1O95751 146 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-220ENST00000555634 KRT6AP02538 564 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 KRT6BP04259 564 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 HGFP14210 728 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ALDH4A1P30038 563 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 SERPINB1P30740 379 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 LSP1P33241 339 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 HNF4AP41235 474 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 KRT6CP48668 564 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ARL4DP49703 201 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 CCR8P51685 355 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 TAP2Q03519 686 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 IFT88Q13099 833 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ARL13AQ5H913 290 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-220ENST00000555634 SH2D4BQ5SQS7 431 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 LIPJQ5W064 366 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ICE2Q659A1 982 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 IRGCQ6NXR0 463 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 SUSD1Q6UWL2 747 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 FAM47EQ6ZV65 393 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 ZNF438Q7Z4V0 828 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 MILR1Q7Z6M3 343 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 CUZD1Q86UP6 607 aa10.82□□□□□ -0.68
SHMT2-220ENST00000555634 NAXDQ8IW45 347 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms