RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ATAD3BQ5T9A4 648 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 DESI1Q6ICB0 168 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 ANKS3Q6ZW76 656 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 DPP10Q8N608 796 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 BEND7Q8N7W2 519 aaPredicted RBP16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 LEMD2Q8NC56 503 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 FBXO44Q9H4M3 255 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 RLIMQ9NVW2 624 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 STSP08842 583 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 ENGP17813 658 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 TGM1P22735 817 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 ALDH7A1P49419 539 aaKnown RBP16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 ACVR1Q04771 509 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 RTN4RL1Q86UN2 441 aaPredicted RBP16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 LRRC49Q8IUZ0 686 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 OR6Q1Q8NGQ2 317 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 TRIM62Q9BVG3 475 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 HEBP1Q9NRV9 189 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 SNX6Q9UNH7 406 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 WDR37Q9Y2I8 494 aa16.61■□□□□ 0.25
PPP4R3A-208ENST00000555462 FAM227AF5H4B4 570 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 SAP18O00422 153 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 CORO1AP31146 461 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 RPS14P62263 151 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 DMC1Q14565 340 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 COQ5Q5HYK3 327 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 CLLU1OSQ5K130 101 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 HSH2DQ96JZ2 352 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 ACOT13Q9NPJ3 140 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 SLC22A14Q9Y267 594 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 DOCK4Q8N1I0 1966 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 TTC34A8MYJ7 566 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 MANBAO00462 879 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 CELF2O95319 508 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 ASGR1P07306 291 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 EPB42P16452 691 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 ARHGDIAP52565 204 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 TUBA3CQ13748 450 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 KIAA0040Q15053 153 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 PCBP1Q15365 356 aaKnown RBP eCLIP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 HIST2H2ACQ16777 129 aaPredicted RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 RSBN1Q5VWQ0 802 aaPredicted RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 HMGN2P46Q86SG4 172 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 HS6ST3Q8IZP7 471 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 C7orf57Q8NEG2 295 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 WFDC5Q8TCV5 224 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 GTPBP3Q969Y2 492 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 PPP3R2Q96LZ3 170 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 PSKH2Q96QS6 385 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 YTHDF1Q9BYJ9 559 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 KCNK2O95069 426 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 C7P10643 843 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 CA8P35219 290 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 NKX3-2P78367 333 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 GANABQ14697 944 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 CHRNA6Q15825 494 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 USP39Q53GS9 565 aaKnown RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 OR2T5Q6IEZ7 315 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 TPGS1Q6ZTW0 290 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 OR8H2Q8N162 312 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 OR2T29Q8NH02 315 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 ZNF641Q96N77 438 aaPredicted RBP16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 NECTIN4Q96NY8 510 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 COPS4Q9BT78 406 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 CENPOQ9BU64 300 aa16.6■□□□□ 0.25
PPP4R3A-208ENST00000555462 C2orf78A6NCI8 922 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 ALDH2P05091 517 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 SERPINB10P48595 397 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 FCGRTP55899 365 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 MXD1Q05195 221 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 TAF12Q16514 161 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 PARK7Q99497 189 aaKnown RBP16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 FAM126AQ9BYI3 521 aaPredicted RBP16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 WDR12Q9GZL7 423 aaKnown RBP16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 PDFQ9HBH1 243 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 CTDSP2O14595 271 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 WDR47O94967 919 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 ITIH1P19827 911 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 SLC35A2P78381 396 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 ARF5P84085 180 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 RTP2Q5QGT7 225 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 IER5LQ5T953 404 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 EFL1Q7Z2Z2 1120 aaKnown RBP16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 ZNF467Q7Z7K2 595 aaPredicted RBP16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 DYNC2LI1Q8TCX1 351 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 ATL1Q8WXF7 558 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 SH3KBP1Q96B97 665 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 MUC13Q9H3R2 512 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 BTBD3Q9Y2F9 522 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 TPRKBQ9Y3C4 175 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 CKAP5Q14008 2032 aa16.59■□□□□ 0.25
PPP4R3A-208ENST00000555462 J3KTA2 159 aa16.58■□□□□ 0.25
PPP4R3A-208ENST00000555462 CLIC1O00299 241 aa16.58■□□□□ 0.25
PPP4R3A-208ENST00000555462 TLL1O43897 1013 aa16.58■□□□□ 0.25
PPP4R3A-208ENST00000555462 RACK1P63244 317 aaKnown RBP16.58■□□□□ 0.25
PPP4R3A-208ENST00000555462 SMARCB1Q12824 385 aa16.58■□□□□ 0.25
PPP4R3A-208ENST00000555462 MED22Q15528 200 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms