RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 AARSD1Q9BTE6 412 aaKnown RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 OR52A5Q9H2C5 316 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 NKX1-2Q9UD57 310 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-213ENST00000555386 SLC39A10Q9ULF5 831 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 PLAGL1Q9UM63 463 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 ASF1AQ9Y294 204 aa9.59□□□□□ -0.87
PSEN1-213ENST00000555386 NCOR2Q9Y618 2525 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 SNRNP200O75643 2136 aaKnown RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 A0A087X1B8 175 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 SLC5A10A0PJK1 596 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 PRR19A6NJB7 356 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 H3BMM5 538 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 B4GAT1O43505 415 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 NUDT21O43809 227 aaKnown RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 ENTPD5O75356 428 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 VPS26AO75436 327 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 PSMG1O95456 288 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 AMD1P17707 334 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 ADSLP30566 484 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 SERPINB5P36952 375 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 CDKN2DP55273 166 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 RAB10P61026 200 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 UBE2IP63279 158 aaKnown RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 POU4F1Q01851 419 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 SPIDRQ14159 915 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 GPR18Q14330 331 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 ZNF460Q14592 562 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 USP10Q14694 798 aaKnown RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 ZNF658BQ4V348 819 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 ACSBG2Q5FVE4 666 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 CFAP157Q5JU67 520 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 HES3Q5TGS1 186 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 HECTD2Q5U5R9 776 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 AGAP9Q5VTM2 703 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 RAPH1Q70E73 1250 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 MAVSQ7Z434 540 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 SPRED1Q7Z699 444 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 PDZD3Q86UT5 571 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 C17orf82Q86X59 251 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 CPNE9Q8IYJ1 553 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 ACVR1CQ8NER5 493 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 OR6C4Q8NGE1 309 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 OR5AR1Q8NGP9 310 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 NCSTNQ92542 709 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 TFGQ92734 400 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 GFM1Q96RP9 751 aaKnown RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 DRC3Q9H069 523 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 ILKAPQ9H0C8 392 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 LRRN3Q9H3W5 708 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 GPAMQ9HCL2 828 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 MRGBPQ9NV56 204 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 PNPOQ9NVS9 261 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 STX18Q9P2W9 335 aaKnown RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 VTI1BQ9UEU0 232 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 KLHL3Q9UH77 587 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 TRMT6Q9UJA5 497 aaKnown RBP9.58□□□□□ -0.88
PSEN1-213ENST00000555386 ACOT9Q9Y305 439 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 RAP2CQ9Y3L5 183 aa9.58□□□□□ -0.88
PSEN1-213ENST00000555386 WDFY3Q8IZQ1 3526 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 FAM95CA0A1B0GW59 222 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 KLHL33A6NCF5 533 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 KRT87PA6NCN2 255 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 VGLL3A8MV65 326 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 GSTM1P09488 218 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 SLC35E2BP0CK96 405 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 JUPP14923 745 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 STMN1P16949 149 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 XRCC1P18887 633 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-213ENST00000555386 ARRB2P32121 409 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 VHLP40337 213 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 BDKRB1P46663 353 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 FASLGP48023 281 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 PTDSS1P48651 473 aaKnown RBP9.57□□□□□ -0.88
PSEN1-213ENST00000555386 CLCN7P51798 805 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 SLC12A2P55011 1212 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 IRF9Q00978 393 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 GSTM4Q03013 218 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 SLC34A1Q06495 639 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 PRKAA1Q13131 559 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 RPA4Q13156 261 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 RCN2Q14257 317 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 KPNB1Q14974 876 aaKnown RBP9.57□□□□□ -0.88
PSEN1-213ENST00000555386 CAPRIN2Q6IMN6 1127 aaKnown RBP9.57□□□□□ -0.88
PSEN1-213ENST00000555386 WASH2PQ6VEQ5 465 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 TMEM26Q6ZUK4 368 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 ULK2Q8IYT8 1036 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 KIRREL3Q8IZU9 778 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 C2orf73Q8N5S3 287 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-213ENST00000555386 OR4E2Q8NGC2 313 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 OR10G6Q8NH81 332 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 SH3KBP1Q96B97 665 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 OLFM1Q99784 485 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 NUDT22Q9BRQ3 303 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 GATA5Q9BWX5 397 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-213ENST00000555386 XKR8Q9H6D3 395 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 CAB39LQ9H9S4 337 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 WASH6PQ9NQA3 447 aa9.57□□□□□ -0.88
PSEN1-213ENST00000555386 POT1Q9NUX5 634 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms