RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FLVCR1-AS1Q8TAF5 88 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 DENND1AQ8TEH3 1009 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 MR1Q95460 341 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 ZUFSPQ96AP4 578 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 TSPAN17Q96FV3 270 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 UBL7Q96S82 380 aaPredicted RBP11.65□□□□□ -0.54
SRP54-206ENST00000555317 CPNE1Q99829 537 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 ACAT2Q9BWD1 397 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 SPRY4Q9C004 299 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 PARVBQ9HBI1 364 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 MRPS30Q9NP92 439 aaKnown RBP11.65□□□□□ -0.54
SRP54-206ENST00000555317 LHX9Q9NQ69 397 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 KCND3Q9UK17 655 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 CROTQ9UKG9 612 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 KLHL20Q9Y2M5 609 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 PCDHB3Q9Y5E6 796 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 AP1M2Q9Y6Q5 423 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 LOC400499M0QZD8 3231 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 HEATR5BQ9P2D3 2071 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 LOC101059948A0A1B0GTJ6 334 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 ZSCAN9O15535 394 aaPredicted RBP11.64□□□□□ -0.55
SRP54-206ENST00000555317 KATNA1O75449 491 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 SLC16A8O95907 504 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 ERGP11308 486 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 PSMB5P28074 263 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 GP5P40197 560 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 RPS15P62841 145 aaKnown RBP11.64□□□□□ -0.55
SRP54-206ENST00000555317 POU4F1Q01851 419 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 NAB1Q13506 487 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 FASTKQ14296 549 aaKnown RBP11.64□□□□□ -0.55
SRP54-206ENST00000555317 ZIC1Q15915 447 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 TAF1BQ53T94 588 aaPredicted RBP11.64□□□□□ -0.55
SRP54-206ENST00000555317 KIAA1614Q5VZ46 1190 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 TLDC1Q6P9B6 456 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 FIGLAQ6QHK4 219 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 SUSD1Q6UWL2 747 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 ADCK2Q7Z695 626 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 PPM1NQ8N819 430 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 OR2L3Q8NG85 312 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 STARD8Q92502 1023 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 SEC14L1Q92503 715 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 MED8Q96G25 268 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 CCDC138Q96M89 665 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 FMO2Q99518 471 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 OLFM1Q99784 485 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 SELENOSQ9BQE4 189 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 FAM60AQ9NP50 221 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 CCDC177Q9NQR7 707 aaPredicted RBP11.64□□□□□ -0.55
SRP54-206ENST00000555317 TXLNGQ9NUQ3 528 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 TAC3Q9UHF0 121 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 SRPK3Q9UPE1 567 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 ATRXP46100 2492 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 KALRNO60229 2985 aa11.64□□□□□ -0.55
SRP54-206ENST00000555317 FAM159BA6NKW6 160 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 TARM1B6A8C7 271 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 C21orf140B9A014 251 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 C9J4A7 227 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ERVH48-1M5A8F1 160 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ZNF749O43361 778 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 PIAS1O75925 651 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 PRKAR1AP10644 381 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ZNF37AP17032 561 aaPredicted RBP11.63□□□□□ -0.55
SRP54-206ENST00000555317 TCN2P20062 427 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 AGXTP21549 392 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 SPRP35270 261 aaPredicted RBP11.63□□□□□ -0.55
SRP54-206ENST00000555317 GRIA3P42263 894 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 AP1S2P56377 157 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ABATP80404 500 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 TIAL1Q01085 375 aaKnown RBP eCLIP11.63□□□□□ -0.556e-7■■■■□ 24.2
SRP54-206ENST00000555317 DNASE1L3Q13609 305 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 USP10Q14694 798 aaKnown RBP11.63□□□□□ -0.55
SRP54-206ENST00000555317 SLMAPQ14BN4 828 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 KBTBD12Q3ZCT8 623 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 TCTE1Q5JU00 501 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 CYHR1Q6ZMK1 362 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 FRA10AC1Q70Z53 315 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 CYS1Q717R9 158 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 MCATQ8IVS2 390 aaKnown RBP11.63□□□□□ -0.55
SRP54-206ENST00000555317 DNAJC22Q8N4W6 341 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ZNF655Q8N720 491 aaPredicted RBP11.63□□□□□ -0.55
SRP54-206ENST00000555317 TTC29Q8NA56 475 aaPredicted RBP11.63□□□□□ -0.55
SRP54-206ENST00000555317 PPFIBP2Q8ND30 876 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 FBF1Q8TES7 1133 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 CT55Q8WUE5 264 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ZNF480Q8WV37 535 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 SNRNP27Q8WVK2 155 aaKnown RBP11.63□□□□□ -0.55
SRP54-206ENST00000555317 ATL1Q8WXF7 558 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 DLG3Q92796 817 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 ALKBH8Q96BT7 664 aaKnown RBP11.63□□□□□ -0.55
SRP54-206ENST00000555317 SLC45A3Q96JT2 553 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 DPH2Q9BQC3 489 aaPredicted RBP11.63□□□□□ -0.55
SRP54-206ENST00000555317 ARHGAP9Q9BRR9 750 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 NDC1Q9BTX1 674 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 SLC12A9Q9BXP2 914 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 TWSG1Q9GZX9 223 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 PCBD2Q9H0N5 130 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 POPDC3Q9HBV1 291 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 LRRC4CQ9HCJ2 640 aa11.63□□□□□ -0.55
SRP54-206ENST00000555317 GPAMQ9HCL2 828 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms