RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 VAMP7P51809 220 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 DLX5P56178 289 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 MAZP56270 477 aaKnown RBP4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 KRTAP10-11P60412 298 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 E2F5Q15329 346 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 PTGISQ16647 500 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 TYSND1Q2T9J0 566 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 LACTB2Q53H82 288 aaPredicted RBP4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 WDR38Q5JTN6 314 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 TXNRD3NBQ6F5E7 133 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 TMEM182Q6ZP80 229 aaPredicted RBP4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 AMIGO1Q86WK6 493 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 IQCA1Q86XH1 822 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 MAPKAPK5-AS1Q8N8E1 139 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 NOA1Q8NC60 698 aaKnown RBP4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 KLHDC9Q8NEP7 349 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 OR52N5Q8NH56 324 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 PIGBQ92521 554 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 ST6GALNAC6Q969X2 333 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 C2orf40Q9H1Z8 148 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 MMP28Q9H239 520 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 SNX25Q9H3E2 840 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 ZNF334Q9HCZ1 680 aaPredicted RBP4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 LEF1Q9UJU2 399 aaPredicted RBP4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 STUB1Q9UNE7 303 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 KCNK7Q9Y2U2 307 aa4.96□□□□□ -1.62
CKS1BP1-201ENST00000555221 BMPR1BO00238 502 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 O00370 1275 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 TSHBP01222 138 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 C9P02748 559 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 RLN1P04808 185 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 PRSS1P07477 247 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 IGHV4-31P0DP07 118 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 TIA1P31483 386 aaKnown RBP eCLIP4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 GSDMDP57764 484 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 B3GALT5-AS1P59052 145 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 PTENP60484 403 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 HERV-K104P61576 105 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 YWHAHQ04917 246 aaPredicted RBP4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 TAF10Q12962 218 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 MEP1BQ16820 701 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 UGP2Q16851 508 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 CTU2Q2VPK5 515 aaKnown RBP4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 ZC2HC1CQ53FD0 456 aaPredicted RBP4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 SLC26A9Q7LBE3 791 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 OTOAQ7RTW8 1153 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 EID3Q8N140 333 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 CIARTQ8N365 385 aaPredicted RBP4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 NHLRC2Q8NBF2 726 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 EXOC4Q96A65 974 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 CTAGE1Q96RT6 745 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 GPATCH1Q9BRR8 931 aaKnown RBP4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 DESI2Q9BSY9 194 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 DNAI2Q9GZS0 605 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 LMAN1LQ9HAT1 526 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 CHST11Q9NPF2 352 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 ADPRHL2Q9NX46 363 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 VPS18Q9P253 973 aa4.95□□□□□ -1.62
CKS1BP1-201ENST00000555221 IGLV9-49A0A0B4J1Y8 123 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 A0A0U1RQK1 487 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 ZNF320A2RRD8 509 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 YDJCA8MPS7 323 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 FCGR3BO75015 233 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 CSTF2P33240 577 aaKnown RBP eCLIP4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 GMPSP49915 693 aaPredicted RBP4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 PHEXP78562 749 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 RBBP5Q15291 538 aaKnown RBP4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 ANKRD20A4Q4UJ75 823 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 PDLIM3Q53GG5 364 aaPredicted RBP4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 ANKRD20A8PQ5CZ79 823 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 SLC35D3Q5M8T2 416 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 ANKRD20A2Q5SQ80 823 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 C20orf194Q5TEA3 1177 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 ANKRD20A1Q5TYW2 823 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 ANKRD20A3Q5VUR7 823 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 SLC35E4Q6ICL7 350 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 OR4A47Q6IF82 309 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 CCDC91Q7Z6B0 441 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 SMIM29Q86T20 159 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 RTN4RL2Q86UN3 420 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 HOOK3Q86VS8 718 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 STPG4Q8N801 248 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 OLIG1Q8TAK6 271 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 SLC26A7Q8TE54 656 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 AFAP1L1Q8TED9 768 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 SEPT1Q8WYJ6 367 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 TMEM143Q96AN5 459 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 PGM2Q96G03 612 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 BSCL2Q96G97 398 aaPredicted RBP4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 PARK7Q99497 189 aaKnown RBP4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 TLE6Q9H808 572 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 MINDY3Q9H8M7 445 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 FAM207AQ9NSI2 230 aaPredicted RBP4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 LIPT1Q9Y234 373 aa4.94□□□□□ -1.62
CKS1BP1-201ENST00000555221 PPIP5K2O43314 1243 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 ITGA3P26006 1051 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 CDX1P47902 265 aaPredicted RBP4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 CACNG1Q06432 222 aa4.93□□□□□ -1.62
CKS1BP1-201ENST00000555221 GPR17Q13304 367 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms