RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 E7ENX8 843 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 HGSO14964 777 aaPredicted RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 SNX3O60493 162 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 SKAP2O75563 359 aaPredicted RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 OR4F21O95013 312 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 LMNAP02545 664 aaKnown RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 TYRP1P17643 537 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 HALP42357 657 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 PIK3CGP48736 1102 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 HNMTP50135 292 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 PNLIPRP1P54315 467 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 ERVPABLB-1P60509 514 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 TAP2Q03519 686 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 TRAF3Q13114 568 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 KRT33BQ14525 404 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 PDCD2Q16342 344 aaPredicted RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 C6orf132Q5T0Z8 1188 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 NKAIN2Q5VXU1 208 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 SPATA21Q7Z572 469 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 THOC6Q86W42 341 aaKnown RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 SNX31Q8N9S9 440 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 PIWIL2Q8TC59 973 aaKnown RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 RAD51AP1Q96B01 352 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 APOLD1Q96LR9 279 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 EBF4Q9BQW3 602 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 ILKAPQ9H0C8 392 aaPredicted RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 KLHL20Q9Y2M5 609 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 TIMM22Q9Y584 194 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 TNPO3Q9Y5L0 923 aaKnown RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 DCHS1Q96JQ0 3298 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 CEP250Q9BV73 2442 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 E7EQ34 232 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 ZNF195O14628 629 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 MAPK9P45984 424 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 RPL14P50914 215 aaKnown RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 CCT8P50990 548 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 HHEXQ03014 270 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 PRKAA1Q13131 559 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 PERM1Q5SV97 790 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 GUSBP11Q6P575 273 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 PIGWQ7Z7B1 504 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 WDR75Q8IWA0 830 aaKnown RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 CDYL2Q8N8U2 506 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 OR4F6Q8NGB9 312 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 OR56A3Q8NH54 315 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 C10orf82Q8WW14 230 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 RSC1A1Q92681 617 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 HBEGFQ99075 208 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 NSRP1Q9H0G5 558 aaKnown RBP10.41□□□□□ -0.74
TDP1-211ENST00000555178 SLC32A1Q9H598 525 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 KIR3DX1Q9H7L2 352 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 RNF11Q9Y3C5 154 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 ANGPTL3Q9Y5C1 460 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 CSNK1G3Q9Y6M4 447 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 PTPRZ1P23471 2315 aaPredicted RBP10.4□□□□□ -0.74
TDP1-211ENST00000555178 PRAMEF10O60809 474 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 VIPP01282 170 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 SYPP08247 313 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 ERGP11308 486 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 CD59P13987 128 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 PKLRP30613 574 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 SERPINB5P36952 375 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 AQP5P55064 265 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 CFHR1Q03591 330 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 C14orf28Q4W4Y0 310 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 CDKL4Q5MAI5 379 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 SCIMPQ6UWF3 145 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 LRRC70Q7Z2Q7 622 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 MYLK4Q86YV6 388 aaPredicted RBP10.4□□□□□ -0.74
TDP1-211ENST00000555178 ADGRF3Q8IZF5 1079 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 TCAIMQ8N3R3 496 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 OR4C6Q8NH72 309 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 FLVCR1-AS1Q8TAF5 88 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 NUF2Q9BZD4 464 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 SYNPO2LQ9H987 977 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 DNAJC11Q9NVH1 559 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 NCDNQ9UBB6 729 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 HAO1Q9UJM8 370 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 BTRCQ9Y297 605 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 USH1CQ9Y6N9 552 aa10.4□□□□□ -0.74
TDP1-211ENST00000555178 FFAR3O14843 346 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 GPR42O15529 346 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 B4GAT1O43505 415 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 CER1O95813 267 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 RPN2P04844 631 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 EPB42P16452 691 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 CD22P20273 847 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 LSSP48449 732 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 HTR6P50406 440 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 CCNG1P51959 295 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 OR1D5P58170 312 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 NHLH1Q02575 133 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 GABPB1Q06547 395 aaPredicted RBP10.39□□□□□ -0.75
TDP1-211ENST00000555178 SLC9B1Q4ZJI4 515 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TTC23LQ6PF05 361 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 FOXR1Q6PIV2 292 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TMEM26Q6ZUK4 368 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 GPRIN3Q6ZVF9 776 aa10.39□□□□□ -0.75
TDP1-211ENST00000555178 TMPRSS9Q7Z410 1059 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms