RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 BTBD1Q9H0C5 482 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 EHD1Q9H4M9 534 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 PFDN4Q9NQP4 134 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 CMTM6Q9NX76 183 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 GMPR2Q9P2T1 348 aaKnown RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 PACSIN3Q9UKS6 424 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 FKBP6O75344 327 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 ETHE1O95571 254 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 RPSAP08865 295 aaKnown RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 GABRG2P18507 467 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 KIAA1024LP59773 190 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 SLC34A1Q06495 639 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 SFSWAPQ12872 951 aaKnown RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 TRAP1Q12931 704 aaKnown RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 CHIT1Q13231 466 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 SMAD2Q15796 467 aaKnown RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 SPATS1Q496A3 300 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 PYCR3Q53H96 274 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 CMPK2Q5EBM0 449 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 ATG9BQ674R7 924 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 ADNP2Q6IQ32 1131 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 KIAA2013Q8IYS2 634 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 RNF175Q8N4F7 328 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 RPLP0P6Q8NHW5 317 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 NEIL2Q969S2 332 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 LRRC58Q96CX6 371 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 CMTM7Q96FZ5 175 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 NRTNQ99748 197 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 SLC39A3Q9BRY0 314 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 TIMM29Q9BSF4 260 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 PHF7Q9BWX1 381 aaPredicted RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 WDR26Q9H7D7 661 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 UBE2ZQ9H832 354 aaPredicted RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 RMI1Q9H9A7 625 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 BRF2Q9HAW0 419 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 LRTM1Q9HBL6 345 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 SPAG4Q9NPE6 437 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 GPR27Q9NS67 375 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 MMP17Q9ULZ9 603 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 SNX6Q9UNH7 406 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 DLGAP4Q9Y2H0 992 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 WDR37Q9Y2I8 494 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 ANGPTL3Q9Y5C1 460 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 DYTNA2CJ06 578 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 IFRD1O00458 451 aaPredicted RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 GIPC1O14908 333 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 CASQ2O14958 399 aaPredicted RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 KMOO15229 486 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 CIB2O75838 187 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 PCDH8O95206 1070 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 TBX6O95947 436 aaPredicted RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 PAK4O96013 591 aaPredicted RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 NPPAP01160 153 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 DNTTP04053 509 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 HSD17B1P14061 328 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 PTPN6P29350 595 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 RANBP1P43487 201 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 GNPDA1P46926 289 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 PTDSS1P48651 473 aaKnown RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 NEK2P51955 445 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 PNLIPRP1P54315 467 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 RPL38P63173 70 aaKnown RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 PHC1P78364 1004 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 CTBSQ01459 385 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 GRSF1Q12849 480 aaKnown RBP eCLIP8.62□□□□□ -1.03
TDP1-210ENST00000554976 NR6A1Q15406 480 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 TPRG1LQ5T0D9 272 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 IRAK1BP1Q5VVH5 260 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 FRG2Q64ET8 278 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 GPR155Q7Z3F1 870 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 VN1R5Q7Z5H4 357 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 APLFQ8IW19 511 aaPredicted RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 SLC15A3Q8IY34 581 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 OR5AR1Q8NGP9 310 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 ATP6V1E2Q96A05 226 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 VPS33AQ96AX1 596 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 DTNBP1Q96EV8 351 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 APIPQ96GX9 242 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 FRG2BQ96QU4 278 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 HOPXQ9BPY8 73 aaPredicted RBP8.62□□□□□ -1.03
TDP1-210ENST00000554976 OSBPL6Q9BZF3 934 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 ACTR8Q9H981 624 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 C1orf109Q9NX04 203 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 SLAMF8Q9P0V8 285 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 CROTQ9UKG9 612 aa8.62□□□□□ -1.03
TDP1-210ENST00000554976 ATG2BQ96BY7 2078 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 LATO43561 262 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 BCKDHAP12694 445 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 ME2P23368 584 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 VARSP26640 1264 aaKnown RBP8.61□□□□□ -1.03
TDP1-210ENST00000554976 TFF2Q03403 129 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 MAD2L1Q13257 205 aaPredicted RBP8.61□□□□□ -1.03
TDP1-210ENST00000554976 NAE1Q13564 534 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 CPSF6Q16630 551 aaKnown RBP eCLIP8.61□□□□□ -1.03
TDP1-210ENST00000554976 LCTLQ6UWM7 567 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 AMZ2Q86W34 360 aa8.61□□□□□ -1.03
TDP1-210ENST00000554976 MSRB3Q8IXL7 192 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms