RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 CWC15Q9P013 229 aaKnown RBP5.14□□□□□ -1.59
MTHFD1-206ENST00000554353 MRPL15Q9P015 296 aaKnown RBP5.14□□□□□ -1.59
MTHFD1-206ENST00000554353 PCYOX1Q9UHG3 505 aa5.14□□□□□ -1.59
MTHFD1-206ENST00000554353 FBXO4Q9UKT5 387 aa5.14□□□□□ -1.59
MTHFD1-206ENST00000554353 TMED5Q9Y3A6 229 aa5.14□□□□□ -1.59
MTHFD1-206ENST00000554353 MTCH2Q9Y6C9 303 aa5.14□□□□□ -1.59
MTHFD1-206ENST00000554353 PTPRJQ12913 1337 aa5.14□□□□□ -1.59
MTHFD1-206ENST00000554353 COL4A4P53420 1690 aaPredicted RBP5.14□□□□□ -1.59
MTHFD1-206ENST00000554353 CFAP54Q96N23 3096 aa5.14□□□□□ -1.59
MTHFD1-206ENST00000554353 MYO7AQ13402 2215 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 FRYLO94915 3013 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 A0A0G2JPF8 293 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 GSTTP1A0A1W2PQM5 241 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 EPOPA6NHQ4 379 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 LINC01548A6NM66 108 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 SRRM3A6NNA2 597 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 A8MV72 311 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 HNRNPCL3B7ZW38 293 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 MCIDASD6RGH6 385 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 H0YCG3 227 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 EXTL3O43909 919 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ZC3H11AO75152 810 aaKnown RBP eCLIP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 CSPG5O95196 566 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 CCNDBP1O95273 360 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 PLAUP00749 431 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 GH1P01241 217 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 HLA-DRAP01903 254 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 MMP3P08254 477 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 HNRNPCL4P0DMR1 293 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 TMEM11P17152 192 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 HOXB9P17482 250 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 GLRA2P23416 452 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 CHRNA3P32297 505 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 RDXP35241 583 aaKnown RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 USP8P40818 1118 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 CAPZA2P47755 286 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ATP5OP48047 213 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 SOX2P48431 317 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 RPS6KA3P51812 740 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ADPRHP54922 357 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 PROK1P58294 105 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 YBEYP58557 167 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 DR1Q01658 176 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 GCNT1Q02742 428 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 PTP4A2Q12974 167 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 RPA4Q13156 261 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 DHX34Q14147 1143 aaKnown RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ZNF268Q14587 947 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 GPNMBQ14956 572 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 EMC2Q15006 297 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 STXBP2Q15833 593 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ZNF805Q5CZA5 627 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 XKR3Q5GH77 459 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 CEP85LQ5SZL2 805 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 GARNL3Q5VVW2 1013 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 LIPMQ5VYY2 423 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 KCTD16Q68DU8 428 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 MIS18BP1Q6P0N0 1132 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 INO80CQ6PI98 192 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ZNF782Q6ZMW2 699 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 RBM44Q6ZP01 1051 aaKnown RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ZNF788Q6ZQV5 615 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 FAM83HQ6ZRV2 1179 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 DENND5BQ6ZUT9 1274 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 MDGA2Q7Z553 956 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 TMCO2Q7Z6W1 182 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 SLC13A5Q86YT5 568 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 TUSC5Q8IXB3 177 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 PEX5LQ8IYB4 626 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 MCOLN2Q8IZK6 566 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 HDDC3Q8N4P3 179 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 SEMA6DQ8NFY4 1073 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 CEP76Q8TAP6 659 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 SETD6Q8TBK2 473 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ZNF564Q8TBZ8 553 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ARNTL2Q8WYA1 636 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 POMGNT1Q8WZA1 660 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 KAT2BQ92831 832 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 RMDN1Q96DB5 314 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 RNFT2Q96EX2 444 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 PGAP3Q96FM1 320 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 C1orf74Q96LT6 269 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 RUFY1Q96T51 708 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 NAP1L3Q99457 506 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ERP44Q9BS26 406 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 NUP85Q9BW27 656 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 GATA5Q9BWX5 397 aaPredicted RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 TEX12Q9BXU0 123 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 RAB17Q9H0T7 212 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 DPH5Q9H2P9 285 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 SMARCAD1Q9H4L7 1026 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 YY1AP1Q9H869 796 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 ZNF304Q9HCX3 659 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 MLXIPLQ9NP71 852 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 PCDHB16Q9NRJ7 776 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 HCFC1R1Q9NWW0 138 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 UVRAGQ9P2Y5 699 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 CNOT8Q9UFF9 292 aaKnown RBP5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 SLC12A6Q9UHW9 1150 aa5.13□□□□□ -1.59
MTHFD1-206ENST00000554353 PTBP2Q9UKA9 531 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms