RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 AKT1P31749 480 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 CA5AP35218 305 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 PTGER4P35408 488 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 MAGEA4P43358 317 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 CARSP49589 748 aaKnown RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 PRLHRP49683 370 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 CDKN1CP49918 316 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 MGAT5Q09328 741 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ART3Q13508 389 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ATP1A4Q13733 1029 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 SSPNQ14714 243 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 FASTKD3Q14CZ7 662 aaKnown RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 PLCL1Q15111 1095 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 TESK1Q15569 626 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 RPE65Q16518 533 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ZXDCQ2QGD7 858 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 KHDC1Q4VXA5 237 aaKnown RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ZNF789Q5FWF6 425 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ZNF648Q5T619 568 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ZNF385CQ66K41 422 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 FAM198BQ6UWH4 519 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 IGFL2Q6UWQ7 119 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 GALNT7Q86SF2 657 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 CUZD1Q86UP6 607 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 CILP2Q8IUL8 1156 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 TMEM126BQ8IUX1 230 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 CNTN4Q8IWV2 1026 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 PALM2Q8IXS6 379 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 GALNT16Q8N428 558 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 RASGEF1AQ8N9B8 481 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 TM9SF4Q92544 642 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 RELTQ969Z4 430 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 CERS2Q96G23 380 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 CFAP36Q96G28 342 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 LINC00615Q96LM1 132 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 FER1L6-AS2Q96M78 137 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 TRIM56Q9BRZ2 755 aaKnown RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 FAM96AQ9H5X1 160 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 VPS37BQ9H9H4 285 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 PLAC1Q9HBJ0 212 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 ARFGAP3Q9NP61 516 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 INTS10Q9NVR2 710 aaKnown RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 NSMCE4AQ9NXX6 385 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 MOCS1Q9NZB8 636 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 DNAJC16Q9Y2G8 782 aa7.47□□□□□ -1.21
ABCD4-220ENST00000553998 KLF2Q9Y5W3 355 aaPredicted RBP7.47□□□□□ -1.21
ABCD4-220ENST00000553998 TNRC6AQ8NDV7 1962 aaKnown RBP7.46□□□□□ -1.21
ABCD4-220ENST00000553998 A0A1B0GUH1 482 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 C17orf113A0A1B0GUU1 675 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 UBA6A0AVT1 1052 aaPredicted RBP7.46□□□□□ -1.22
ABCD4-220ENST00000553998 ZG16O60844 167 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 NDUFS3O75489 264 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 ESR1P03372 595 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 OR56A5P0C7T3 313 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 PRSS56P0CW18 603 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 STX2P32856 288 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 HALP42357 657 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 TSFMP43897 325 aaKnown RBP7.46□□□□□ -1.22
ABCD4-220ENST00000553998 ARL4DP49703 201 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 CTSCP53634 463 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 NAB1Q13506 487 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 SEMA3AQ14563 771 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 NCF4Q15080 339 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 GPR19Q15760 415 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 SEPT7Q16181 437 aaKnown RBP7.46□□□□□ -1.22
ABCD4-220ENST00000553998 HSP90AA5PQ58FG0 334 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 DCAF10Q5QP82 559 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 HP1BP3Q5SSJ5 553 aaPredicted RBP7.46□□□□□ -1.22
ABCD4-220ENST00000553998 TMTC4Q5T4D3 741 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 PRAMEF17Q5VTA0 474 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 FAM69BQ5VUD6 431 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 ZNF470Q6ECI4 717 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 WDR93Q6P2C0 686 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 TMEM220Q6QAJ8 160 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 CRTC3Q6UUV7 619 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 C3orf62Q6ZUJ4 267 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 CCDC25Q86WR0 208 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 RAB43Q86YS6 212 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 TRAPPC5Q8IUR0 188 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 SYTL1Q8IYJ3 562 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 ZADH2Q8N4Q0 377 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 OTUD6BQ8N6M0 293 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 C2CD4AQ8NCU7 369 aaPredicted RBP7.46□□□□□ -1.22
ABCD4-220ENST00000553998 CDKL2Q92772 493 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 NACC2Q96BF6 587 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 LURAP1Q96LR2 239 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 TSSK1BQ9BXA7 367 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 ILKAPQ9H0C8 392 aaPredicted RBP7.46□□□□□ -1.22
ABCD4-220ENST00000553998 ANKZF1Q9H8Y5 726 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 HRASLS2Q9NWW9 162 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 MARCH4Q9P2E8 410 aaPredicted RBP7.46□□□□□ -1.22
ABCD4-220ENST00000553998 GNPTGQ9UJJ9 305 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 FBXO5Q9UKT4 447 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 NFU1Q9UMS0 254 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 OSGIN2Q9Y236 505 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 DCHS2Q6V1P9 2916 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 SPTBP11277 2137 aa7.46□□□□□ -1.22
ABCD4-220ENST00000553998 TCRBV9S1A1TA0A576 114 aa7.45□□□□□ -1.22
ABCD4-220ENST00000553998 MGAT4DA6NG13 374 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms