RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 IRAK4Q9NWZ3 460 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 ACTR10Q9NZ32 417 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 SPATA7Q9P0W8 599 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 POMT2Q9UKY4 750 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 DHRS7Q9Y394 339 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 TEX264Q9Y6I9 313 aa8.07□□□□□ -1.12
PSEN1-209ENST00000553855 CEP295Q9C0D2 2601 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 ARHGEF17Q96PE2 2063 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 IGHV5-51A0A0C4DH38 117 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 A0A0J9YY10 115 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 A0A1W2PNU3 283 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 SLC9B1P1A6NJY1 282 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 C9orf172C9J069 976 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 E7ESA3 106 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 TAF4O00268 1085 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 RASGRF2O14827 1237 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 KLF4O43474 513 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 FKBP9O95302 570 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 C1orf105O95561 183 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 CHRM5P08912 532 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 MPC1LP0DKB6 136 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 SAT1P21673 171 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 CD9P21926 228 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 NME2P22392 152 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 STX2P32856 288 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 PHBP35232 272 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 KPNA2P52292 529 aaKnown RBP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 IL2P60568 153 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 SLC7A5Q01650 507 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 PCDH1Q08174 1060 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 TSTA3Q13630 321 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 KYNUQ16719 465 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 KLHL38Q2WGJ6 581 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 ACSBG2Q5FVE4 666 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 ZNF789Q5FWF6 425 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 TEDDM1Q5T9Z0 273 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 STEAP4Q687X5 459 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 SPESP1Q6UW49 350 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 BNC2Q6ZN30 1099 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 CCDC81Q6ZN84 652 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 C3orf62Q6ZUJ4 267 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 STRA8Q7Z7C7 330 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 GALNT7Q86SF2 657 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 SLC26A11Q86WA9 606 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 ZFAND4Q86XD8 727 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 VRK3Q8IV63 474 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 CNTN4Q8IWV2 1026 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 SPACA3Q8IXA5 215 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 GPR135Q8IZ08 494 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 CACNA2D3Q8IZS8 1091 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 AGGF1Q8N302 714 aaeCLIP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 MMGT1Q8N4V1 131 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 MCOLN3Q8TDD5 553 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 GATAD2BQ8WXI9 593 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 IFT81Q8WYA0 676 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 TCTN2Q96GX1 697 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 ELMO2Q96JJ3 720 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 SLC41A2Q96JW4 573 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 FCRL4Q96PJ5 515 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 CCNL2Q96S94 520 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 GPR21Q99679 349 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 CTRCQ99895 268 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 AARSD1Q9BTE6 412 aaKnown RBP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 LRRC1Q9BTT6 524 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 TRIM55Q9BYV6 548 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 ULBP3Q9BZM4 244 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 FGF21Q9NSA1 209 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 UTP6Q9NYH9 597 aaKnown RBP8.06□□□□□ -1.12
PSEN1-209ENST00000553855 FOXJ2Q9P0K8 574 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 SERTAD3Q9UJW9 196 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 ACSL6Q9UKU0 697 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 PLAGL1Q9UM63 463 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 ICKQ9UPZ9 632 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 CDYLQ9Y232 598 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 B3GALT1Q9Y5Z6 326 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 ASXL3Q9C0F0 2248 aa8.06□□□□□ -1.12
PSEN1-209ENST00000553855 RP1P56715 2156 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 PLXNB3Q9ULL4 1909 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 KNTC1P50748 2209 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 PMS2P1A4D2B8 440 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 BTN3A3O00478 584 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 RAD1O60671 282 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 STK17BO94768 372 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 CCNDBP1O95273 360 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 B3GALT4O96024 378 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 AHSGP02765 367 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 CAPNS1P04632 268 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 C8GP07360 202 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 HBQ1P09105 142 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 EBLN1P0CF75 366 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 UGT2B7P16662 529 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 MCM3P25205 808 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 OAS2P29728 719 aaKnown RBP8.05□□□□□ -1.12
PSEN1-209ENST00000553855 PKLRP30613 574 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 RPA3P35244 121 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-209ENST00000553855 GMPRP36959 345 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 MAGEA4P43358 317 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 BDKRB1P46663 353 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 CLCN7P51798 805 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 TUBB4BP68371 445 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms