RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 PSMB5P28074 263 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 PTPN4P29074 926 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 GRIA3P42263 894 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 CCR10P46092 362 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 RGS4P49798 205 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 CDKN2DP55273 166 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 C19orf57Q0VDD7 668 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 ZC3H12BQ5HYM0 836 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 RBM20Q5T481 1227 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 ATP1A1-AS1Q5TC04 95 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 DUPD1Q68J44 220 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 FCRL6Q6DN72 434 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 TLDC1Q6P9B6 456 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 PAQR3Q6TCH7 311 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 SUSD1Q6UWL2 747 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 ZNF572Q7Z3I7 529 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 PIWIL4Q7Z3Z4 852 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 MCATQ8IVS2 390 aaKnown RBP9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 SYTL1Q8IYJ3 562 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 ZNF843Q8N446 348 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 OR2L3Q8NG85 312 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 EEF1AKMT1Q8WVE0 214 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 SMPDL3AQ92484 453 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 SEC14L1Q92503 715 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 RUFY1Q96T51 708 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 PKP4Q99569 1192 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 ACAT2Q9BWD1 397 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 FAM117AQ9C073 453 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 IRAK4Q9NWZ3 460 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 MOCS1Q9NZB8 636 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 CDC23Q9UJX2 597 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 CORO1CQ9ULV4 474 aaPredicted RBP9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 KLK4Q9Y5K2 254 aa9.81□□□□□ -0.84
HNRNPC-208ENST00000553753 ZNF839A8K0R7 811 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 SYF2O95926 243 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 SFTPCP11686 197 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 AGXTP21549 392 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 PNLIPRP1P54315 467 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 MGAT5Q09328 741 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 DEFB109BQ30KR1 87 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 PTCHD3Q3KNS1 767 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 LCN10Q6JVE6 187 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 RHBDD2Q6NTF9 364 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 UBE2R2Q712K3 238 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 ZNF655Q8N720 491 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 GPATCH11Q8N954 259 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 PYROXD1Q8WU10 500 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 ZNF480Q8WV37 535 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 APOBEC4Q8WW27 367 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 NDC1Q9BTX1 674 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 NLNQ9BYT8 704 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 RAB17Q9H0T7 212 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 GRHL1Q9NZI5 618 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 SRPK3Q9UPE1 567 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 VWA7Q9Y334 891 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 E7ENX8 843 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 EIF3HO15372 352 aaKnown RBP eCLIP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 SRPX2O60687 465 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 CTSVO60911 334 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 URI1O94763 535 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 FURINP09958 794 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 RAB40ALP0C0E4 278 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 CMPK1P30085 196 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 RPA3P35244 121 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 PLTPP55058 493 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 POLE2P56282 527 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 IL2P60568 153 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 RPS18P62269 152 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 YBX1P67809 324 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 TAP2Q03519 686 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 CKAP4Q07065 602 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 PDAP1Q13442 181 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 TSTA3Q13630 321 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 NAA25Q14CX7 972 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 HECTD2Q5U5R9 776 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 ZNF385CQ66K41 422 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 FAM45BPQ6NSW5 357 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 SYVN1Q86TM6 617 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 PALM2Q8IXS6 379 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 MYO1HQ8N1T3 1032 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 PPFIBP2Q8ND30 876 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 FAM45AQ8TCE6 357 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 MCOLN3Q8TDD5 553 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 DLG3Q92796 817 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 DPH7Q9BTV6 452 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 TXLNGQ9NUQ3 528 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 GEMIN8Q9NWZ8 242 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 DHCR7Q9UBM7 475 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 POLHQ9Y253 713 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 PSAT1Q9Y617 370 aa9.8□□□□□ -0.84
HNRNPC-208ENST00000553753 ZNF462Q96JM2 2506 aa9.79□□□□□ -0.84
HNRNPC-208ENST00000553753 C8GP07360 202 aa9.79□□□□□ -0.84
HNRNPC-208ENST00000553753 CAPN1P07384 714 aa9.79□□□□□ -0.84
HNRNPC-208ENST00000553753 ALAS2P22557 587 aa9.79□□□□□ -0.84
HNRNPC-208ENST00000553753 SSTR1P30872 391 aa9.79□□□□□ -0.84
HNRNPC-208ENST00000553753 ARSFP54793 590 aa9.79□□□□□ -0.84
HNRNPC-208ENST00000553753 DCDP81605 110 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-208ENST00000553753 CAV1Q03135 178 aa9.79□□□□□ -0.84
HNRNPC-208ENST00000553753 PRDX1Q06830 199 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-208ENST00000553753 UGT8Q16880 541 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms