RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 SMU1Q2TAY7 513 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ADPRMQ3LIE5 342 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ATP13A5Q4VNC0 1218 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 TMEM236Q5W0B7 351 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 TXNDC8Q6A555 127 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SHQ1Q6PI26 577 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 GALNT13Q8IUC8 556 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 CCDC71Q8IV32 467 aaPredicted RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ARL14EPQ8N8R7 260 aaPredicted RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 HJURPQ8NCD3 748 aaPredicted RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZFP90Q8TF47 636 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 OVCA2Q8WZ82 227 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 UBE2FQ969M7 185 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SH3YL1Q96HL8 342 aaPredicted RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 REXO5Q96IC2 774 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 APOLD1Q96LR9 279 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 HTATIP2Q9BUP3 242 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SLC29A3Q9BZD2 475 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 AKIP1Q9NQ31 210 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 INIPQ9NRY2 104 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRNAU1APQ9NX07 287 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 TMPRSS11EQ9UL52 423 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 LRFN2Q9ULH4 789 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SH3GLB1Q9Y371 365 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 PCDHGA10Q9Y5H3 936 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SNX5Q9Y5X3 404 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 PMF1-BGLAPU3KQ54 211 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 MYOFQ9NZM1 2061 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF99A8MXY4 864 aaPredicted RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 WNT9AO14904 365 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 YY2O15391 372 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 BNIP3LO60238 219 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ADAM23O75077 832 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 UGT2B11O75310 529 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ERN1O75460 977 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 GABARAPO95166 117 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 FADS2O95864 444 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 MT-ND2P03891 347 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SEMG1P04279 462 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ITPKAP23677 461 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 HOXA9P31269 272 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 CD70P32970 193 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 RPIAP49247 311 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 TUFMP49411 452 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 PHEXP78562 749 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 GSTM4Q03013 218 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ELAVL2Q12926 359 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 DGKKQ5KSL6 1271 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 EGFLAMQ63HQ2 1017 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 LRRC66Q68CR7 880 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ADNP2Q6IQ32 1131 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 CRTC1Q6UUV9 634 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SERPINA13PQ6UXR4 307 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF783Q6ZMS7 281 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 CCDC81Q6ZN84 652 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ANKRD13BQ86YJ7 626 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZZZ3Q8IYH5 903 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 CLECL1Q8IZS7 167 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 TMEM132CQ8N3T6 1108 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 TMCO5AQ8N6Q1 288 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SLC43A3Q8NBI5 491 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 PIK3C3Q8NEB9 887 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 OR7A2PQ8NGA2 310 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF566Q969W8 418 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 HHIPQ96QV1 700 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 NEURL2Q9BR09 285 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 REXO4Q9GZR2 422 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 GABARAPL1Q9H0R8 117 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRIT1Q9H3H1 467 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ELOVL6Q9H5J4 265 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 RDH14Q9HBH5 336 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 PRDM8Q9NQV8 689 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 STARD7Q9NQZ5 370 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 THG1LQ9NWX6 298 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 BLOC1S6Q9UL45 172 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 CPQQ9Y646 472 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 MICAL3Q7RTP6 2002 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 MKI67P46013 3256 aaKnown RBP6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 DENND4CQ5VZ89 1909 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 SOBPA7XYQ1 873 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 MYO1GB0I1T2 1018 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 MTX2O75431 263 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 SERPINB7O75635 380 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 KRT6AP02538 564 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 KRT6BP04259 564 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 ANXA5P08758 320 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 NUDT7P0C024 238 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 CCDC159P0C7I6 412 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 COL6A1P12109 1028 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 CD22P20273 847 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 ACVR2AP27037 513 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 AOAHP28039 575 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 RYKP34925 604 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 KRT20P35900 424 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 HPCAL1P37235 193 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 SLC6A12P48065 614 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 KRT6CP48668 564 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 CRYBA2P53672 197 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 WNT3P56703 355 aa6.73□□□□□ -1.33
LINC-ROR-201ENST00000553704 VBP1P61758 197 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms