RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 NINJ2Q9NZG7 142 aa17.76■□□□□ 0.43
CPSF2-202ENST00000553427 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.76■□□□□ 0.43
CPSF2-202ENST00000553427 ANKMY1Q9P2S6 941 aa17.76■□□□□ 0.43
CPSF2-202ENST00000553427 SERTAD3Q9UJW9 196 aa17.76■□□□□ 0.43
CPSF2-202ENST00000553427 ADAMTS6Q9UKP5 1117 aa17.76■□□□□ 0.43
CPSF2-202ENST00000553427 NOVA2Q9UNW9 492 aaKnown RBP17.76■□□□□ 0.43
CPSF2-202ENST00000553427 EFSO43281 561 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 SCRG1O75711 98 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 CCNDBP1O95273 360 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 PSMB5P28074 263 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 SPRP35270 261 aaPredicted RBP17.75■□□□□ 0.43
CPSF2-202ENST00000553427 GRIA3P42263 894 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 SLC12A2P55011 1212 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 ZKSCAN8Q15776 578 aaPredicted RBP17.75■□□□□ 0.43
CPSF2-202ENST00000553427 FIGLAQ6QHK4 219 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 CCDC81Q6ZN84 652 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 VASH2Q86V25 355 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 TMEM126BQ8IUX1 230 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 FAM20CQ8IXL6 584 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 SYTL1Q8IYJ3 562 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 PPM1NQ8N819 430 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 GALNT6Q8NCL4 622 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 FAM117AQ9C073 453 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 ACSS3Q9H6R3 686 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 STOX2Q9P2F5 926 aaPredicted RBP17.75■□□□□ 0.43
CPSF2-202ENST00000553427 LHX6Q9UPM6 363 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 PLCL2Q9UPR0 1127 aa17.75■□□□□ 0.43
CPSF2-202ENST00000553427 MTO1Q9Y2Z2 717 aaKnown RBP17.75■□□□□ 0.43
CPSF2-202ENST00000553427 SNRNP200O75643 2136 aaKnown RBP17.75■□□□□ 0.43
CPSF2-202ENST00000553427 ZNF500O60304 480 aaPredicted RBP17.74■□□□□ 0.43
CPSF2-202ENST00000553427 KRT37O76014 449 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 SYF2O95926 243 aaKnown RBP17.74■□□□□ 0.43
CPSF2-202ENST00000553427 CMPK1P30085 196 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 RPA3P35244 121 aaPredicted RBP17.74■□□□□ 0.43
CPSF2-202ENST00000553427 PGGT1BP53609 377 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 ABATP80404 500 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 PHKG1Q16816 387 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 ZC3H12BQ5HYM0 836 aaKnown RBP17.74■□□□□ 0.43
CPSF2-202ENST00000553427 FCRL6Q6DN72 434 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 SBSNQ6UWP8 590 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 ZNF517Q6ZMY9 492 aaPredicted RBP17.74■□□□□ 0.43
CPSF2-202ENST00000553427 CEP97Q8IW35 865 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 KIAA1143Q96AT1 154 aaPredicted RBP17.74■□□□□ 0.43
CPSF2-202ENST00000553427 CRELD1Q96HD1 420 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 ZNF285Q96NJ3 590 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 CYTH2Q99418 400 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 MIPEPQ99797 713 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 PCBD2Q9H0N5 130 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 CDC42EP4Q9H3Q1 356 aaKnown RBP17.74■□□□□ 0.43
CPSF2-202ENST00000553427 CPNE5Q9HCH3 593 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 GPAMQ9HCL2 828 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 PCDHGA4Q9Y5G9 962 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 AP1M2Q9Y6Q5 423 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 MGAQ8IWI9 3026 aa17.74■□□□□ 0.43
CPSF2-202ENST00000553427 TEX51A0A1B0GUA7 166 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 OR2A25A4D2G3 310 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 E7EQ34 232 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 TERTO14746 1132 aaKnown RBP17.73■□□□□ 0.43
CPSF2-202ENST00000553427 HBQ1P09105 142 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 HIST1H2AGP0C0S8 130 aaPredicted RBP17.73■□□□□ 0.43
CPSF2-202ENST00000553427 CCNYL3P0C7X3 344 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 LIFP15018 202 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 HIST1H2ADP20671 130 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 SAT1P21673 171 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 CCND1P24385 295 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 RORAP35398 523 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 CXADRP78310 365 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 RELAQ04206 551 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 PRDX1Q06830 199 aaKnown RBP17.73■□□□□ 0.43
CPSF2-202ENST00000553427 SRSF6Q13247 344 aaKnown RBP17.73■□□□□ 0.43
CPSF2-202ENST00000553427 ZNF460Q14592 562 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 USP10Q14694 798 aaKnown RBP17.73■□□□□ 0.43
CPSF2-202ENST00000553427 SLMAPQ14BN4 828 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 PPP1R3AQ16821 1122 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 ICE2Q659A1 982 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 TLDC1Q6P9B6 456 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 SUSD1Q6UWL2 747 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 RNF44Q7L0R7 432 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 GPR155Q7Z3F1 870 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 ADAMTSL2Q86TH1 951 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 GPR135Q8IZ08 494 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 EIF1ADQ8N9N8 165 aaKnown RBP17.73■□□□□ 0.43
CPSF2-202ENST00000553427 N4BP2L2Q92802 583 aaPredicted RBP17.73■□□□□ 0.43
CPSF2-202ENST00000553427 SLC45A3Q96JT2 553 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 HIST1H2AHQ96KK5 128 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 HIST1H2AJQ99878 128 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 H2AFJQ9BTM1 129 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 TRIM54Q9BYV2 358 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 DERL2Q9GZP9 239 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 GPN2Q9H9Y4 310 aaPredicted RBP17.73■□□□□ 0.43
CPSF2-202ENST00000553427 LHX9Q9NQ69 397 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 CCDC177Q9NQR7 707 aaPredicted RBP17.73■□□□□ 0.43
CPSF2-202ENST00000553427 EURLQ9NYK6 297 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 PADI1Q9ULC6 663 aa17.73■□□□□ 0.43
CPSF2-202ENST00000553427 LOC101059948A0A1B0GTJ6 334 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 PABPN1LA6NDY0 278 aaKnown RBP17.72■□□□□ 0.43
CPSF2-202ENST00000553427 C21orf140B9A014 251 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 HCRTR1O43613 425 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 OR2B3O76000 313 aa17.72■□□□□ 0.43
CPSF2-202ENST00000553427 NTRK1P04629 796 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms