RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 RIC8AQ9NPQ8 531 aa4.83□□□□□ -1.64
ATXN3-218ENST00000553309 GTSE1Q9NYZ3 720 aa4.83□□□□□ -1.64
ATXN3-218ENST00000553309 GDE1Q9NZC3 331 aa4.83□□□□□ -1.64
ATXN3-218ENST00000553309 DDX25Q9UHL0 483 aaKnown RBP4.83□□□□□ -1.64
ATXN3-218ENST00000553309 TMED5Q9Y3A6 229 aa4.83□□□□□ -1.64
ATXN3-218ENST00000553309 MTCL1Q9Y4B5 1905 aaKnown RBP4.83□□□□□ -1.64
ATXN3-218ENST00000553309 PDCD11Q14690 1871 aaKnown RBP4.83□□□□□ -1.64
ATXN3-218ENST00000553309 SETD2Q9BYW2 2564 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-218ENST00000553309 MYH6P13533 1939 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 IGLV5-37A0A075B6J1 123 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 PLSCR5A0PG75 271 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 MYBPHLA2RUH7 354 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 GOLGA6L9A6NEM1 432 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 HEPACAM2A8MVW5 462 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 EBAG9O00559 213 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 RRP8O43159 456 aaKnown RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 RGS11O94810 467 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 C22orf31O95567 290 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 APBB3O95704 486 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 RPN1P04843 607 aaKnown RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 ZNF8P17098 575 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 SRD5A1P18405 259 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 MCM3P25205 808 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 FMO4P31512 558 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 HNRNPH1P31943 449 aaKnown RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 S100A5P33763 92 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 TSPAN7P41732 249 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 BLKP51451 505 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 ARPC4P59998 168 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 MYBPHQ13203 477 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 SNX1Q13596 522 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 RUNX2Q13950 521 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 RASA2Q15283 850 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 TAF11Q15544 211 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 XKR9Q5GH70 373 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 GPATCH4Q5T3I0 446 aaKnown RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 WLSQ5T9L3 541 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 FUT10Q6P4F1 479 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 KLHL24Q6TFL4 600 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 TUBA1AQ71U36 451 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 CENPQQ7L2Z9 268 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 ADGRG6Q86SQ4 1221 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 CEP57Q86XR8 500 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 APLFQ8IW19 511 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 CEP57L1Q8IYX8 460 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 TTC39CQ8N584 583 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 DEFB119Q8N690 84 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 FRMD1Q8N878 549 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 CCDC89Q8N998 374 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 LILRB1Q8NHL6 650 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 SUN5Q8TC36 379 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 ACMSDQ8TDX5 336 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 ANKRD49Q8WVL7 239 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 RLN3Q8WXF3 142 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 DNASE2BQ8WZ79 361 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 N4BP2L2Q92802 583 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 LRFN5Q96NI6 719 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 TMEM175Q9BSA9 504 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 NACAP1Q9BZK3 213 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 C8orf33Q9H7E9 229 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 KIF9Q9HAQ2 790 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 TCF7L2Q9NQB0 619 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 ARGLU1Q9NWB6 273 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 IL20Q9NYY1 176 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 CACNG4Q9UBN1 327 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 STK39Q9UEW8 545 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 PIN4Q9Y237 131 aaKnown RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 ZNF510Q9Y2H8 683 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 GPR52Q9Y2T5 361 aa4.82□□□□□ -1.64
ATXN3-218ENST00000553309 UTP20O75691 2785 aaKnown RBP4.82□□□□□ -1.64
ATXN3-218ENST00000553309 FRMPD4Q14CM0 1322 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 GOLGA6L4A6NEF3 574 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 KLRF2D3W0D1 207 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 DDX39AO00148 427 aaKnown RBP4.81□□□□□ -1.64
ATXN3-218ENST00000553309 ATP6V1G1O75348 118 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 EGFP01133 1207 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 HLA-EP13747 358 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 DARSP14868 501 aaKnown RBP4.81□□□□□ -1.64
ATXN3-218ENST00000553309 DAOP14920 347 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 HOXA9P31269 272 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 RYKP34925 604 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 CCR2P41597 374 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 YWHAZP63104 245 aaKnown RBP4.81□□□□□ -1.64
ATXN3-218ENST00000553309 POU3F1Q03052 451 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-218ENST00000553309 GFPT1Q06210 699 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-218ENST00000553309 HNRNPDQ14103 355 aaKnown RBP4.81□□□□□ -1.64
ATXN3-218ENST00000553309 SOWAHAQ2M3V2 549 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 USP41Q3LFD5 358 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 ARMC3Q5W041 872 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 RHBDF2Q6PJF5 856 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 RALGPS2Q86X27 583 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-218ENST00000553309 SFTPA2Q8IWL1 248 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 MAB21L3Q8N8X9 362 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 ANKRD42Q8N9B4 389 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 ZNF114Q8NC26 417 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 APPL2Q8NEU8 664 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 SPATA3Q8NHX4 192 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 ARRDC2Q8TBH0 407 aa4.81□□□□□ -1.64
ATXN3-218ENST00000553309 SETD7Q8WTS6 366 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms