RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FEZ2Q9UHY8 353 aaPredicted RBP8.67□□□□□ -1.02
SYNE2-209ENST00000553308 CSMD2Q7Z408 3487 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 POLQO75417 2590 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 LOC105369274A0A096LPK9 316 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 LOC102723532A0A0G2JNH3 316 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 SYCE3A1L190 88 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 HYKKA2RU49 373 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 CCDC162PA2VCL2 907 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 KRT87PA6NCN2 255 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 GOLGA6L19H0YKK7 550 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 C19orf84I3L1E1 186 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 FFAR3O14843 346 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 GPR42O15529 346 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 PJA2O43164 708 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 STK10O94804 968 aaKnown RBP8.66□□□□□ -1.02
SYNE2-209ENST00000553308 RASAL1O95294 804 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 WDPCPO95876 746 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 UQCRHP07919 91 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 OR56A5P0C7T3 313 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 MSNP26038 577 aaKnown RBP8.66□□□□□ -1.02
SYNE2-209ENST00000553308 CTNNA2P26232 953 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 CCR7P32248 378 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 ADORA2A-AS1P86434 159 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 PLOD1Q02809 727 aaPredicted RBP8.66□□□□□ -1.02
SYNE2-209ENST00000553308 OCA2Q04671 838 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 HSPA14Q0VDF9 509 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 CDSNQ15517 529 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 TESK1Q15569 626 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 SF1Q15637 639 aaKnown RBP8.66□□□□□ -1.02
SYNE2-209ENST00000553308 FAM214AQ32MH5 1076 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 WASHC2DQ5SRD0 308 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 FAAH2Q6GMR7 532 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 MTFR2Q6P444 385 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 DARS2Q6PI48 645 aaKnown RBP8.66□□□□□ -1.02
SYNE2-209ENST00000553308 CNSTQ6PJW8 725 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 LAPTM4BQ86VI4 370 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 DCUN1D3Q8IWE4 304 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 OR4N4Q8N0Y3 316 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 OR2L8Q8NGY9 312 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 CFAP61Q8NHU2 1237 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 HAS2Q92819 552 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 SLC22A18Q96BI1 424 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 C10orf90Q96M02 699 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 FERMT1Q9BQL6 677 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.66□□□□□ -1.02
SYNE2-209ENST00000553308 ENAMQ9NRM1 1142 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 IL1RAPL1Q9NZN1 696 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 INTUQ9ULD6 942 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 TFR2Q9UP52 801 aa8.66□□□□□ -1.02
SYNE2-209ENST00000553308 MRPS2Q9Y399 296 aaKnown RBP8.66□□□□□ -1.02
SYNE2-209ENST00000553308 ADGRG4Q8IZF6 3080 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 PKDREJQ9NTG1 2253 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 IGLV3-12A0A075B6K2 115 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 IGHV1-45A0A0A0MS14 117 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 A0A0J9YVX5 310 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 MROH6A6NGR9 719 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 IQCF5A8MTL0 148 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 IDSB3KWA1 339 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 RASGRF2O14827 1237 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 PRICKLE3O43900 615 aaPredicted RBP8.65□□□□□ -1.02
SYNE2-209ENST00000553308 SLC19A2O60779 497 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 MFAP3LO75121 409 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 BMP10O95393 424 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 METTL18O95568 372 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 CRYABP02511 175 aaKnown RBP8.65□□□□□ -1.02
SYNE2-209ENST00000553308 EIF2S1P05198 315 aaKnown RBP8.65□□□□□ -1.02
SYNE2-209ENST00000553308 SERPINA7P05543 415 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 ITGAMP11215 1152 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 FBLP22087 321 aaKnown RBP8.65□□□□□ -1.02
SYNE2-209ENST00000553308 FDXRP22570 491 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 HADHBP55084 474 aaKnown RBP8.65□□□□□ -1.02
SYNE2-209ENST00000553308 TRIM14Q14142 442 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 C3AR1Q16581 482 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 CCDC38Q502W7 563 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 HIBCHQ6NVY1 386 aaPredicted RBP8.65□□□□□ -1.02
SYNE2-209ENST00000553308 PRMT9Q6P2P2 845 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 XKRXQ6PP77 449 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 NDUFAF7Q7L592 441 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 LRRC45Q96CN5 670 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 PPP1R2P1Q96PQ5 205 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 MIPEPQ99797 713 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 ZC3H7BQ9UGR2 993 aaKnown RBP8.65□□□□□ -1.02
SYNE2-209ENST00000553308 TINAGQ9UJW2 476 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.65□□□□□ -1.02
SYNE2-209ENST00000553308 FAM169AQ9Y6X4 670 aa8.65□□□□□ -1.02
SYNE2-209ENST00000553308 NCOA6Q14686 2063 aaPredicted RBP8.65□□□□□ -1.03
SYNE2-209ENST00000553308 A0A1W2PQ72 361 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 TARM1B6A8C7 271 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 SRPX2O60687 465 aaPredicted RBP8.64□□□□□ -1.03
SYNE2-209ENST00000553308 PRAMEF2O60811 474 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 GPC4O75487 556 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 WFS1O76024 890 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 GOT2P00505 430 aaKnown RBP8.64□□□□□ -1.03
SYNE2-209ENST00000553308 RPN2P04844 631 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 TPM3P06753 285 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 CXCR2P25025 360 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 PSMA3P25788 255 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 SSTR2P30874 369 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 KIR3DL1P43629 444 aa8.64□□□□□ -1.03
SYNE2-209ENST00000553308 BDKRB1P46663 353 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms