RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 NPRL3Q12980 569 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 MAD2L1BPQ15013 274 aaPredicted RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 TAF1AQ15573 450 aaPredicted RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 LRIT3Q3SXY7 679 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 AGMOQ6ZNB7 445 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 PLEKHH3Q7Z736 793 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 DENND1CQ8IV53 801 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 PARP16Q8N5Y8 322 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 MDGA1Q8NFP4 955 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 HEBP1Q9NRV9 189 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 TMEM248Q9NWD8 314 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 PAQR5Q9NXK6 330 aaPredicted RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 SLC25A37Q9NYZ2 338 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 UGT2A1Q9Y4X1 527 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CTDSP2O14595 271 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 STK16O75716 305 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 CSF2P04141 144 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ALPIP09923 528 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 TNFRSF1BP20333 461 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 TACR2P21452 398 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 CRATP43155 626 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 BOP1Q14137 746 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ZNF544Q6NX49 715 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 RAB43Q86YS6 212 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 CAMKK1Q8N5S9 505 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 GLB1L3Q8NCI6 653 aaPredicted RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 WDR36Q8NI36 951 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 PSD2Q9BQI7 771 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ACTL8Q9H568 366 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 SLC52A3Q9NQ40 469 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 GPRC5BQ9NZH0 403 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 PEX16Q9Y5Y5 336 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ISPDA4D126 451 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 TNFRSF11BO00300 401 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 SUV39H1O43463 412 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 PCMT1P22061 227 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 DGKAP23743 735 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 RRM2P31350 389 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 CPT1AP50416 773 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 CDH12P55289 794 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 RACK1P63244 317 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 CD83Q01151 205 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ZNF181Q2M3W8 571 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 RUNDC3AQ59EK9 446 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 FAM217AQ8IXS0 508 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ASCC1Q8N9N2 400 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ZNF675Q8TD23 568 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 TRNT1Q96Q11 434 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ATG10Q9H0Y0 220 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 DYRK4Q9NR20 520 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 SLC6A13Q9NSD5 602 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 SNTG1Q9NSN8 517 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 TMEM161AQ9NX61 479 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 PCDHGB6Q9Y5F9 930 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 FER1L6Q2WGJ9 1857 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 CCNDBP1O95273 360 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ESR1P03372 595 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ITGALP20701 1170 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 OR1E2P47887 323 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 YBEYP58557 167 aaPredicted RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 TUBA1BP68363 451 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 MRPS6P82932 125 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 TIAL1Q01085 375 aaKnown RBP eCLIP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ABHD18Q0P651 414 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 TSTQ16762 297 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 UPP1Q16831 310 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 SUSD1Q6UWL2 747 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 TUBA1AQ71U36 451 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 VASH1Q7L8A9 365 aaPredicted RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 PRSS48Q7RTY5 328 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 SERPINA9Q86WD7 417 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 DNASE1L2Q92874 299 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 ZNF300Q96RE9 604 aaPredicted RBP11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 CSNK1G1Q9HCP0 422 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 FBXO8Q9NRD0 319 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 MICAL3Q7RTP6 2002 aa11.29□□□□□ -0.6
PPFIA2-227ENST00000552948 GNG14A0A1W2PPG7 69 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ANKRD34BA5PLL1 514 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 PRAMEF1O95521 474 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 F2P00734 622 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ANXA5P08758 320 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 NEK5Q6P3R8 708 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 SHQ1Q6PI26 577 aaKnown RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TTC9BQ8N6N2 239 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 GPR156Q8NFN8 814 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 OR9Q1Q8NGQ5 310 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 IPCEF1Q8WWN9 437 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 NELL1Q92832 810 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 RTP3Q9BQQ7 232 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 SLIRPQ9GZT3 109 aaKnown RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TNKS2Q9H2K2 1166 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 CCSER2Q9H7U1 834 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 SP140LQ9H930 580 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TM9SF3Q9HD45 589 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 ABCB9Q9NP78 766 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 RAD18Q9NS91 495 aa11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 OLA1Q9NTK5 396 aaKnown RBP11.28□□□□□ -0.6
PPFIA2-227ENST00000552948 TMEFF2Q9UIK5 374 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms