RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CCDC88CQ9P219 2028 aa8.37□□□□□ -1.07
TMEM116-217ENST00000552801 SHANK1Q9Y566 2161 aa8.37□□□□□ -1.07
TMEM116-217ENST00000552801 IGLV3-16A0A075B6K0 115 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 AGAP14A8MT82 685 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 H7C0S8 307 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 CES2O00748 559 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 SHOX2O60902 331 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 KLF7O75840 302 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 SYF2O95926 243 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 CAPN1P07384 714 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 ERVK-10P10266 1014 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 SOX11P35716 441 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 CDKN1CP49918 316 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 RAB28P51157 221 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 HNRNPH2P55795 449 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 PRAMEP78395 509 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 OCA2Q04671 838 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 HSPA14Q0VDF9 509 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 GRM7Q14831 915 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 SF1Q15637 639 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 ZSCAN26Q16670 478 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 FAM214AQ32MH5 1076 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 GLE1Q53GS7 698 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 FASTKD1Q53R41 847 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 HSP90B2PQ58FF3 399 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 DNAJC21Q5F1R6 531 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 AARS2Q5JTZ9 985 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 TCTE1Q5JU00 501 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 YOD1Q5VVQ6 348 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 PRAMEF13Q5VWM6 474 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 AFTPHQ6ULP2 937 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 FAM180AQ6UWF9 173 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 IGFL3Q6UXB1 125 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 PEX26Q7Z412 305 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 TAX1BP1Q86VP1 789 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 SYCE1Q8N0S2 351 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 TAB3Q8N5C8 712 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 OR6P1Q8NGX9 317 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 DNAJB14Q8TBM8 379 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 ASZ1Q8WWH4 475 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 CAVIN3Q969G5 261 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 NACC2Q96BF6 587 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 MOCOSQ96EN8 888 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 MAGEB10Q96LZ2 347 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 FOPNLQ96NB1 174 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 OR2A14Q96R47 310 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 SH3GL2Q99962 352 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 RAB11FIP5Q9BXF6 653 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 CHRNA10Q9GZZ6 450 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 ARNT2Q9HBZ2 717 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 MRM3Q9HC36 420 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 FAM60AQ9NP50 221 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 PIH1D1Q9NWS0 290 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 EURLQ9NYK6 297 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 IL1RAPL1Q9NZN1 696 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 ERRFI1Q9UJM3 462 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 FBXL4Q9UKA2 621 aa8.36□□□□□ -1.07
TMEM116-217ENST00000552801 NXT1Q9UKK6 140 aaKnown RBP8.36□□□□□ -1.07
TMEM116-217ENST00000552801 TRBV5-4A0A0C4DH59 114 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 A0A1B0GX78 115 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 HEATR9A2RTY3 570 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 GRID2IPA4D2P6 1211 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 SEC16AO15027 2179 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 CBX6O95503 412 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 MYBL2P10244 700 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 SNRPBP14678 240 aaKnown RBP8.35□□□□□ -1.07
TMEM116-217ENST00000552801 MAGP20916 626 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 MMP11P24347 488 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 COL8A1P27658 744 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 PTPN7P35236 360 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 CDH17Q12864 832 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 TUBB8Q3ZCM7 444 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 PTRHD1Q6GMV3 140 aaKnown RBP8.35□□□□□ -1.07
TMEM116-217ENST00000552801 EMBQ6PCB8 327 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 PACS1Q6VY07 963 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 PPP1R32Q7Z5V6 425 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 MCATQ8IVS2 390 aaKnown RBP8.35□□□□□ -1.07
TMEM116-217ENST00000552801 DCUN1D3Q8IWE4 304 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 LINC00528Q8N1L1 170 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 C2orf73Q8N5S3 287 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-217ENST00000552801 EIF1ADQ8N9N8 165 aaKnown RBP8.35□□□□□ -1.07
TMEM116-217ENST00000552801 FKBP10Q96AY3 582 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 OSBPL9Q96SU4 736 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 SELENOSQ9BQE4 189 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 GORASP1Q9BQQ3 440 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 YIPF2Q9BWQ6 316 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 ZNF552Q9H707 407 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-217ENST00000552801 WDR54Q9H977 334 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 SPHK1Q9NYA1 384 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 TFR2Q9UP52 801 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 DYTNA2CJ06 578 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 CCDC162PA2VCL2 907 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 ERI2A8K979 691 aaKnown RBP8.35□□□□□ -1.07
TMEM116-217ENST00000552801 DSCR3O14972 297 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 PFDN6O15212 129 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 LILRA1O75019 489 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 LDLRP01130 860 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 IFNB1P01574 187 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 ALBP02768 609 aa8.35□□□□□ -1.07
TMEM116-217ENST00000552801 PRSS56P0CW18 603 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms