RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	MED8	Q96G25	268 aa		11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	PPM1M	Q96MI6	270 aa		11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	KCTD14	Q9BQ13	255 aa	Predicted RBP	11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	SGPP1	Q9BX95	441 aa		11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	ZDHHC5	Q9C0B5	715 aa		11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	OR52A5	Q9H2C5	316 aa		11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	GPRC5B	Q9NZH0	403 aa		11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	PPT2	Q9UMR5	302 aa		11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	SH2B3	Q9UQQ2	575 aa		11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	TMEM98	Q9Y2Y6	226 aa		11.16	□□□□□ -0.62
RAB5C-208	ENST00000551338	TRBV5-3	A0A0A0MS03	114 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338		A0A1W2PP55	124 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	EIF4E1B	A6NMX2	242 aa	Known RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338		H0YIV9	168 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	TIPRL	O75663	272 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	KCNH1	O95259	989 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	MTHFD1	P11586	935 aa	Known RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	HSD3B1	P14060	373 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	NCK1	P16333	377 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	HOXB9	P17482	250 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	HSD3B2	P26439	372 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	TEAD1	P28347	426 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	MAPK1	P28482	360 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	TIE1	P35590	1138 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	MTHFR	P42898	656 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	TNFRSF4	P43489	277 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	SEC13	P55735	322 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	OR4D2	P58180	307 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	MTPN	P58546	118 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	PHC1	P78364	1004 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	PLOD1	Q02809	727 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	KLC1	Q07866	573 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	HTR4	Q13639	388 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	FGL2	Q14314	439 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	IRF4	Q15306	451 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	GTDC1	Q4AE62	458 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	ADNP2	Q6IQ32	1131 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	UNC5D	Q6UXZ4	953 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	NUDT18	Q6ZVK8	323 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	ERMP1	Q7Z2K6	904 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	TRMT11	Q7Z4G4	463 aa	Known RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	IFNE	Q86WN2	208 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	SPPL2C	Q8IUH8	684 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	OXR1	Q8N573	874 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	LMNTD1	Q8N9Z9	388 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	OR8J3	Q8NGG0	315 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	OR9A1P	Q8NGU1	263 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	FAM131C	Q96AQ9	280 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	APOLD1	Q96LR9	279 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	RIPOR3	Q96MK2	946 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	TSSK3	Q96PN8	268 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	BTBD9	Q96Q07	612 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	HHIP	Q96QV1	700 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	LGR4	Q9BXB1	951 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	DPEP2	Q9H4A9	486 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	BATF3	Q9NR55	127 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	MBNL1	Q9NR56	388 aa	Known RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	CCM2L	Q9NUG4	571 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	ARMC1	Q9NVT9	282 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	SLC25A37	Q9NYZ2	338 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	VAPA	Q9P0L0	249 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	ZFR2	Q9UPR6	939 aa	Known RBP	11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	MAN2B2	Q9Y2E5	1009 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	TMED5	Q9Y3A6	229 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	PRKAB1	Q9Y478	270 aa		11.15	□□□□□ -0.62
RAB5C-208	ENST00000551338	HEATR5B	Q9P2D3	2071 aa		11.15	□□□□□ -0.63
RAB5C-208	ENST00000551338	DHRS12	A0PJE2	317 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	RNASEH1	O60930	286 aa	Known RBP	11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	PCDH8	O95206	1070 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	ETHE1	O95571	254 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	IL6	P05231	212 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	PGR	P06401	933 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	PNLIPRP1	P54315	467 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	PLIN5	Q00G26	463 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	CYP4F3	Q08477	520 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	STARD3	Q14849	445 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	RUNDC3A	Q59EK9	446 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	TMEM196	Q5HYL7	178 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	LRIF1	Q5T3J3	769 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	KIAA1211L	Q6NV74	962 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	SLCO4C1	Q6ZQN7	724 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	MTSS1L	Q765P7	747 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	TMPRSS11B	Q86T26	416 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	PDZD3	Q86UT5	571 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	LRRTM4	Q86VH4	590 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	RALGPS2	Q86X27	583 aa	Predicted RBP	11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	RIMKLA	Q8IXN7	391 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	FAM9C	Q8IZT9	166 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	GATA6	Q92908	595 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	TESC	Q96BS2	214 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	WDR34	Q96EX3	536 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	NR1H4	Q96RI1	486 aa	Predicted RBP	11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	EBPL	Q9BY08	206 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	TEX101	Q9BY14	249 aa		11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	PAIP1	Q9H074	479 aa	Known RBP	11.14	□□□□□ -0.63
RAB5C-208	ENST00000551338	KCNH6	Q9H252	994 aa		11.14	□□□□□ -0.63

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