RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 NUP214P35658 2090 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 TRIM64A6NGJ6 449 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 YY2O15391 372 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 TULP3O75386 442 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 CREG1O75629 220 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 SERPINA1P01009 418 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 ALBP02768 609 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 RHOP08100 348 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 GZMMP51124 257 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 ALDH3A2P51648 485 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 METAP1P53582 386 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 CTSCP53634 463 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 MAPK10P53779 464 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 PTPN5P54829 565 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 GBX1Q14549 363 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 GPR141Q7Z602 305 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 METTL3Q86U44 580 aaKnown RBP13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 ZDHHC13Q8IUH4 622 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 FRS2Q8WU20 508 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 SLC47A1Q96FL8 570 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 ITCHQ96J02 903 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 CCDC115Q96NT0 180 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 TOR3AQ9H497 397 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 TDP1Q9NUW8 608 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 RWDD3Q9Y3V2 267 aa13.78□□□□□ -0.2
CALCOCO1-218ENST00000550804 SPTBN5Q9NRC6 3674 aaKnown RBP13.77□□□□□ -0.2
CALCOCO1-218ENST00000550804 MESP2Q0VG99 397 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 DAG1Q14118 895 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 SPIDRQ14159 915 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 C16orf72Q14CZ0 275 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 NEDD8Q15843 81 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 FAM109BQ6ICB4 259 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 DOK6Q6PKX4 331 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 KCTD8Q6ZWB6 473 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 RTL10Q7L3V2 364 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 CYP2U1Q7Z449 544 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 ISOC1Q96CN7 298 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 DCUN1D5Q9BTE7 237 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 UGT2B28Q9BY64 529 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 SLC29A3Q9BZD2 475 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 AMBRA1Q9C0C7 1298 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 POLR1BQ9H9Y6 1135 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 CXorf21Q9HAI6 301 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 DCAF13Q9NV06 445 aaKnown RBP13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 EXD2Q9NVH0 621 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 SNX6Q9UNH7 406 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 ITM2BQ9Y287 266 aa13.77□□□□□ -0.21
CALCOCO1-218ENST00000550804 TRIM64CA6NLI5 447 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 GNGT2O14610 69 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 PER2O15055 1255 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 C7P10643 843 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 TIMP2P16035 220 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 AMD1P17707 334 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 PDHA2P29803 388 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 STT3AP46977 705 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 PIGFQ07326 219 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 GRIN2CQ14957 1233 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 GPR107Q5VW38 600 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 FRG2Q64ET8 278 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 NOXRED1Q6NXP6 359 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 SPESP1Q6UW49 350 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 MICU2Q8IYU8 434 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 CDC26Q8NHZ8 85 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 MCOLN3Q8TDD5 553 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 FRG2BQ96QU4 278 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 BARD1Q99728 777 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 SPHK2Q9NRA0 654 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 PKD2L2Q9NZM6 624 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 IFT80Q9P2H3 777 aaPredicted RBP13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 BTBD3Q9Y2F9 522 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 E7EQ34 232 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 TSPAN6O43657 245 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 C8GP07360 202 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 THRBP10828 461 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 EEF1B2P24534 225 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 RAB39AQ14964 217 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 ZBED5Q49AG3 693 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 METTL2BQ6P1Q9 378 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 LRRC70Q7Z2Q7 622 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 PLPP6Q8IY26 295 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 L3MBTL4Q8NA19 623 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 TNIP2Q8NFZ5 429 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 PNPT1Q8TCS8 783 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 ADAMTS16Q8TE57 1224 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 ING5Q8WYH8 240 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 C12orf43Q96C57 262 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 FAM120BQ96EK7 910 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 MED8Q96G25 268 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 LRRC3BQ96PB8 259 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 CPPED1Q9BRF8 314 aaPredicted RBP13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 KCNH6Q9H252 994 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 ASIC5Q9NY37 505 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 PCDHGA8Q9Y5G5 932 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 NOTCH4Q99466 2003 aa13.76□□□□□ -0.21
CALCOCO1-218ENST00000550804 ARHGEF33A8MVX0 844 aa13.75□□□□□ -0.21
CALCOCO1-218ENST00000550804 RFXANKO14593 260 aa13.75□□□□□ -0.21
CALCOCO1-218ENST00000550804 DIRAS1O95057 198 aa13.75□□□□□ -0.21
CALCOCO1-218ENST00000550804 ATE1O95260 518 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms