RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 TMEM126BQ8IUX1 230 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 OR2L3Q8NG85 312 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 OR2A1Q8NGT9 310 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 OR1L3Q8NH93 324 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 ZNF501Q96CX3 271 aaPredicted RBP13.23□□□□□ -0.29
TROAP-213ENST00000550709 MED8Q96G25 268 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 PDLIM5Q96HC4 596 aaKnown RBP13.23□□□□□ -0.29
TROAP-213ENST00000550709 HIST1H2AHQ96KK5 128 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 CCDC138Q96M89 665 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 HIST1H2AJQ99878 128 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 H2AFJQ9BTM1 129 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 TRIM54Q9BYV2 358 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 DPH1Q9BZG8 443 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 ATG10Q9H0Y0 220 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 FANCEQ9HB96 536 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 INTS7Q9NVH2 962 aaKnown RBP13.23□□□□□ -0.29
TROAP-213ENST00000550709 IRAK4Q9NWZ3 460 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 ARL15Q9NXU5 204 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 STOX2Q9P2F5 926 aaPredicted RBP13.23□□□□□ -0.29
TROAP-213ENST00000550709 CTNNAL1Q9UBT7 734 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 TAC3Q9UHF0 121 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 ZZEF1O43149 2961 aa13.23□□□□□ -0.29
TROAP-213ENST00000550709 A0A087WUV0 522 aaPredicted RBP13.22□□□□□ -0.29
TROAP-213ENST00000550709 CTSBP07858 339 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 INHBAP08476 426 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 CCDC166P0CW27 439 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 ATXN8OSP0DMR3 200 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 CMPK1P30085 196 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 ATP1A2P50993 1020 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 RAB10P61026 200 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 TLE3Q04726 772 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 NAE1Q13564 534 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 TSNQ15631 228 aaKnown RBP13.22□□□□□ -0.29
TROAP-213ENST00000550709 FCRL6Q6DN72 434 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 TRMT10CQ7L0Y3 403 aaKnown RBP13.22□□□□□ -0.29
TROAP-213ENST00000550709 TIPARPQ7Z3E1 657 aaKnown RBP13.22□□□□□ -0.29
TROAP-213ENST00000550709 DTX1Q86Y01 620 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 CACNA2D3Q8IZS8 1091 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 IL22RA1Q8N6P7 574 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 GALNT6Q8NCL4 622 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 NKD1Q969G9 470 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 CRELD1Q96HD1 420 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 DPH7Q9BTV6 452 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 SPRTNQ9H040 489 aaPredicted RBP13.22□□□□□ -0.29
TROAP-213ENST00000550709 POPDC3Q9HBV1 291 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 MRPS30Q9NP92 439 aaKnown RBP13.22□□□□□ -0.29
TROAP-213ENST00000550709 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.22□□□□□ -0.29
TROAP-213ENST00000550709 SERTAD3Q9UJW9 196 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 PILRAQ9UKJ1 303 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 IKBKGQ9Y6K9 419 aa13.22□□□□□ -0.29
TROAP-213ENST00000550709 V9GYY5 206 aaPredicted RBP13.22□□□□□ -0.29
TROAP-213ENST00000550709 ANKRD11Q6UB99 2663 aaPredicted RBP13.22□□□□□ -0.29
TROAP-213ENST00000550709 USP24Q9UPU5 2620 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 NRP2O60462 931 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 SCRG1O75711 98 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 WISP3O95389 354 aaPredicted RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 SLU7O95391 586 aaKnown RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 MSH2P43246 934 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 ITGA1P56199 1179 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 CSHL1Q14406 222 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 ZKSCAN8Q15776 578 aaPredicted RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 MANEAQ5SRI9 462 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 BROXQ5VW32 411 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 AGTRAPQ6RW13 159 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 SBSNQ6UWP8 590 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 C6orf15Q6UXA7 325 aaPredicted RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 FRA10AC1Q70Z53 315 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 BPHLQ86WA6 291 aaPredicted RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 MCATQ8IVS2 390 aaKnown RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 LRRC56Q8IYG6 542 aaPredicted RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 NLGN4XQ8N0W4 816 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 DNAJC22Q8N4W6 341 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 NLGN4YQ8NFZ3 816 aaPredicted RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 OR8K5Q8NH50 307 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 SLC44A1Q8WWI5 657 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 FCRL4Q96PJ5 515 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 PAFAH2Q99487 392 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 FUT8Q9BYC5 575 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 SPRY4Q9C004 299 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 DERL2Q9GZP9 239 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 ANKZF1Q9H8Y5 726 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 CPNE5Q9HCH3 593 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 SLC6A20Q9NP91 592 aa13.21□□□□□ -0.29
TROAP-213ENST00000550709 CCDC177Q9NQR7 707 aaPredicted RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 TMEM184BQ9Y519 407 aaPredicted RBP13.21□□□□□ -0.29
TROAP-213ENST00000550709 EXOC1LA0A1B0GW35 172 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 HMX2A2RU54 273 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.2□□□□□ -0.3
TROAP-213ENST00000550709 RIPK2O43353 540 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 CTSVO60911 334 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 OR2B3O76000 313 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 DLGAP3O95886 979 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 ENO2P09104 434 aaPredicted RBP13.2□□□□□ -0.3
TROAP-213ENST00000550709 SLC35E2BP0CK96 405 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 CRABP2P29373 138 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 AP1S2P56377 157 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 TBPL1P62380 186 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 PRDX1Q06830 199 aaKnown RBP13.2□□□□□ -0.3
TROAP-213ENST00000550709 PPP1R3AQ16821 1122 aa13.2□□□□□ -0.3
TROAP-213ENST00000550709 COL28A1Q2UY09 1125 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms