RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 AKAP9Q99996 3911 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 PCSK5Q92824 1860 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 A0A1B0GX78 115 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 OR51F1A6NGY5 319 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 ISM1B1AKI9 464 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 AGPSO00116 658 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 CNOT3O75175 753 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 SUN1O94901 812 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 ONECUT2O95948 504 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 ALBP02768 609 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 UMODP07911 640 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 MAGP20916 626 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 MMP11P24347 488 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 GRNP28799 593 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 PEBP1P30086 187 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 PKLRP30613 574 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 STIP1P31948 543 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 ACVR1Q04771 509 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 AIMP2Q13155 320 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 NAA30Q147X3 362 aaPredicted RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 BRD3Q15059 726 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 NR6A1Q15406 480 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 CRB2Q5IJ48 1285 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 YOD1Q5VVQ6 348 aaPredicted RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 UNC5DQ6UXZ4 953 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 PEX26Q7Z412 305 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 DCUN1D3Q8IWE4 304 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 DNAAF3Q8N9W5 541 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 OR13J1Q8NGT2 312 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 ASZ1Q8WWH4 475 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 DLG3Q92796 817 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 C19orf60Q96EN9 201 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 C5orf34Q96MH7 638 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 RANBP9Q96S59 729 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 TMEM121Q9BTD3 319 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 MENTQ9BUN1 341 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 RAB11FIP5Q9BXF6 653 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 FRMD8P1Q9BZ68 369 aaPredicted RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 SLC26A1Q9H2B4 701 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 WDR54Q9H977 334 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 MRM3Q9HC36 420 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 INTS7Q9NVH2 962 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 ASF1BQ9NVP2 202 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 PIH1D1Q9NWS0 290 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 EURLQ9NYK6 297 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 NXT1Q9UKK6 140 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 AMFRQ9UKV5 643 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 PLAGL1Q9UM63 463 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 CDYLQ9Y232 598 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 TDRKHQ9Y2W6 561 aaKnown RBP7.32□□□□□ -1.24
NEK3-201ENST00000550331 MED13LQ71F56 2210 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 CROCCQ5TZA2 2017 aa7.32□□□□□ -1.24
NEK3-201ENST00000550331 MDC1Q14676 2089 aaKnown RBP7.31□□□□□ -1.24
NEK3-201ENST00000550331 OR1I1O60431 355 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 GPC4O75487 556 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 FKBP9O95302 570 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 GOT2P00505 430 aaKnown RBP7.31□□□□□ -1.24
NEK3-201ENST00000550331 APOA4P06727 396 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 CTSBP07858 339 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 PIM1P11309 404 aaPredicted RBP7.31□□□□□ -1.24
NEK3-201ENST00000550331 ITGAXP20702 1163 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 CD9P21926 228 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 ADRA1DP25100 572 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 CCR7P32248 378 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 PPARGP37231 505 aaPredicted RBP7.31□□□□□ -1.24
NEK3-201ENST00000550331 HSPA14Q0VDF9 509 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 GRB7Q14451 532 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 GRM7Q14831 915 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 SLC9A5Q14940 896 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 CCDC38Q502W7 563 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 ZC3H12BQ5HYM0 836 aaKnown RBP7.31□□□□□ -1.24
NEK3-201ENST00000550331 AARS2Q5JTZ9 985 aaKnown RBP7.31□□□□□ -1.24
NEK3-201ENST00000550331 TCTE1Q5JU00 501 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 TSTD2Q5T7W7 516 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 PRAMEF13Q5VWM6 474 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 RAD9BQ6WBX8 426 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 NAPRTQ6XQN6 538 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 TTLL10Q6ZVT0 673 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 ZNF534Q76KX8 674 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 NLRP9Q7RTR0 991 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 OVCH1Q7RTY7 1134 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 KIAA1328Q86T90 577 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 MCATQ8IVS2 390 aaKnown RBP7.31□□□□□ -1.24
NEK3-201ENST00000550331 ADGRG4Q8IZF6 3080 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 SLC34A3Q8N130 599 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 TXLNBQ8N3L3 684 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 ZADH2Q8N4Q0 377 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 CISD2Q8N5K1 135 aaKnown RBP7.31□□□□□ -1.24
NEK3-201ENST00000550331 LINC01555Q8NAE3 123 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 OR52K1Q8NGK4 314 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 OR2L8Q8NGY9 312 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 OR4L1Q8NH43 312 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 PPP4R1Q8TF05 950 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 COG1Q8WTW3 980 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 UBE2Q2Q8WVN8 375 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 INPP5DQ92835 1189 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 HDAC10Q969S8 669 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 MRFAP1L1Q96HT8 127 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 ZNF285Q96NJ3 590 aa7.31□□□□□ -1.24
NEK3-201ENST00000550331 WDR77Q9BQA1 342 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms