RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 SBSNQ6UWP8 590 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 CEACAM20Q6UY09 585 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 CYS1Q717R9 158 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 CMC1Q7Z7K0 106 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 KMT5CQ86Y97 462 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 CTAGE3PQ8IX95 158 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 OR2L3Q8NG85 312 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 FAM45AQ8TCE6 357 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 GPR22Q99680 433 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 ULBP3Q9BZM4 244 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 EPB41L4BQ9H329 900 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 PRORYQ9H606 182 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 STARD5Q9NSY2 213 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 ABCF3Q9NUQ8 709 aa10.79□□□□□ -0.68
RAB5B-208ENST00000550283 CUEDC1Q9NWM3 386 aaPredicted RBP10.79□□□□□ -0.68
RAB5B-208ENST00000550283 STOX2Q9P2F5 926 aaPredicted RBP10.79□□□□□ -0.68
RAB5B-208ENST00000550283 LOC105369274A0A096LPK9 316 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 LOC102723532A0A0G2JNH3 316 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 STMND1H3BQB6 276 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 ACSL3O95573 720 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 CATP04040 527 aaKnown RBP10.78□□□□□ -0.68
RAB5B-208ENST00000550283 CBSLP0DN79 551 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 ENO3P13929 434 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-208ENST00000550283 ITGAXP20702 1163 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 OAS2P29728 719 aaKnown RBP10.78□□□□□ -0.68
RAB5B-208ENST00000550283 CBSP35520 551 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 CCNFP41002 786 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 KCNC1P48547 511 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 CSRP3P50461 194 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 RAB15P59190 212 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 NFKB2Q00653 900 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 IL11RAQ14626 422 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 SF1Q15637 639 aaKnown RBP10.78□□□□□ -0.68
RAB5B-208ENST00000550283 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.78□□□□□ -0.68
RAB5B-208ENST00000550283 GLE1Q53GS7 698 aaKnown RBP10.78□□□□□ -0.68
RAB5B-208ENST00000550283 ATP1A1-AS1Q5TC04 95 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 ARHGAP40Q5TG30 622 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 FRMPD2BQ6IN97 320 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 FIGLAQ6QHK4 219 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 PLD3Q8IV08 490 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 CACNA2D3Q8IZS8 1091 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 OR4N4Q8N0Y3 316 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 FBXO15Q8NCQ5 510 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-208ENST00000550283 PTERQ96BW5 349 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 FOPNLQ96NB1 174 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 BBC3Q96PG8 261 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-208ENST00000550283 FMO2Q99518 471 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 SLC12A9Q9BXP2 914 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 TXLNGYQ9BZA5 131 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 ASPSCR1Q9BZE9 553 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 B3GNT4Q9C0J1 378 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 ATG10Q9H0Y0 220 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 SPATA7Q9P0W8 599 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 TAC3Q9UHF0 121 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 LNPEPQ9UIQ6 1025 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 RARRES3Q9UL19 164 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 PCSK5Q92824 1860 aa10.78□□□□□ -0.68
RAB5B-208ENST00000550283 UNC79Q9P2D8 2635 aa10.77□□□□□ -0.68
RAB5B-208ENST00000550283 MATN2O00339 956 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 NDC80O14777 642 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 RRP8O43159 456 aaKnown RBP10.77□□□□□ -0.69
RAB5B-208ENST00000550283 ZBTB14O43829 449 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 STATHP02808 62 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 RPN2P04844 631 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 GSTA2P09210 222 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 FURINP09958 794 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 GCAP28676 217 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 GP5P40197 560 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 GCGRP47871 477 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 ARL4DP49703 201 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 IL2P60568 153 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 CXADRP78310 365 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 IRF9Q00978 393 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 TSTA3Q13630 321 aaPredicted RBP10.77□□□□□ -0.69
RAB5B-208ENST00000550283 OR4D1Q15615 310 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 TSNQ15631 228 aaKnown RBP10.77□□□□□ -0.69
RAB5B-208ENST00000550283 ZKSCAN8Q15776 578 aaPredicted RBP10.77□□□□□ -0.69
RAB5B-208ENST00000550283 PTCHD3Q3KNS1 767 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 FBXO48Q5FWF7 155 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 TMEM164Q5U3C3 297 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 FBXO42Q6P3S6 717 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 PPP1R3BQ86XI6 285 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 RELL1Q8IUW5 271 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 CARFQ8N187 725 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 CT55Q8WUE5 264 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 PYCR2Q96C36 320 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 OR4K3Q96R72 315 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 CPNE1Q99829 537 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 FUT8Q9BYC5 575 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 DPH1Q9BZG8 443 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 ANKZF1Q9H8Y5 726 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 PDE7BQ9NP56 450 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 UTP6Q9NYH9 597 aaKnown RBP10.77□□□□□ -0.69
RAB5B-208ENST00000550283 CORO1CQ9ULV4 474 aaPredicted RBP10.77□□□□□ -0.69
RAB5B-208ENST00000550283 LHX6Q9UPM6 363 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 PCDHGA4Q9Y5G9 962 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 FER1L5A0AVI2 2057 aa10.77□□□□□ -0.69
RAB5B-208ENST00000550283 OR2A25A4D2G3 310 aa10.76□□□□□ -0.69
RAB5B-208ENST00000550283 K7ENP7 123 aa10.76□□□□□ -0.69
RAB5B-208ENST00000550283 EIF3FO00303 357 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms