RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 TMED5Q9Y3A6 229 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 PSIP1O75475 530 aaKnown RBP18■□□□□ 0.47
PRPF40B-208ENST00000548436 FGBP02675 491 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 CEBPBP17676 345 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 IRS1P35568 1242 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 PREPP48147 710 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 ARSFP54793 590 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 CCSMST1Q4G0I0 132 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 NOXRED1Q6NXP6 359 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 FAM162AQ96A26 154 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 TIFAQ96CG3 184 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 ITCHQ96J02 903 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 FAM83CQ9BQN1 747 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 ITM2BQ9Y287 266 aa18■□□□□ 0.47
PRPF40B-208ENST00000548436 CLGNO14967 610 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 SCELO95171 688 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 XPAP23025 273 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 MMP12P39900 470 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 NRIP1P48552 1158 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 GRIN2CQ14957 1233 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 ZNF284Q2VY69 593 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 LIPIQ6XZB0 460 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 THOC6Q86W42 341 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 OR52E4Q8NGH9 312 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 DNAJB8Q8NHS0 232 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 OTUB2Q96DC9 234 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 SLC47A1Q96FL8 570 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 EBPLQ9BY08 206 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 RMND5AQ9H871 391 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 FBXO10Q9UK96 956 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 TCF20Q9UGU0 1960 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 A0A087WXM4 84 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 FAM220BPB1ANY3 271 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 E7EQ34 232 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 CREG1O75629 220 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 PRKD3O94806 890 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 ALPLP05186 524 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 CISD3P0C7P0 127 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 MAPK1P28482 360 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 PCSK6P29122 969 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 SLC5A2P31639 672 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 ALDH3A2P51648 485 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 IST1P53990 364 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 IRF8Q02556 426 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 DAG1Q14118 895 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 PON2Q15165 354 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 DHCR24Q15392 516 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 ZIK1Q3SY52 487 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 TCEAL5Q5H9L2 206 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 LIPJQ5W064 366 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 OR4F3Q6IEY1 312 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 ABRAXAS1Q6UWZ7 409 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 GPR149Q86SP6 731 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 STK32CQ86UX6 486 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 C12orf40Q86WS4 652 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 TMEM132CQ8N3T6 1108 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 NETO1Q8TDF5 533 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 GLYATL1Q969I3 302 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 FCRL1Q96LA6 429 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 OSBPL6Q9BZF3 934 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 DCAF13Q9NV06 445 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 TUBA8Q9NY65 449 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 DKK3Q9UBP4 350 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 AP3M1Q9Y2T2 418 aa17.99■□□□□ 0.47
PRPF40B-208ENST00000548436 C1QCP02747 245 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 MYCLP1P12525 358 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 MAP4P27816 1152 aaKnown RBP17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 LAPTM5Q13571 262 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 KCNC3Q14003 757 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 PLCL1Q15111 1095 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 XKR6Q5GH73 641 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 LDLRAP1Q5SW96 308 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 PARS2Q7L3T8 475 aaKnown RBP17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 ZNF551Q7Z340 670 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 GPR180Q86V85 440 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 FAM9CQ8IZT9 166 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 WDR20Q8TBZ3 569 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 SP7Q8TDD2 431 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 FAM120BQ96EK7 910 aaKnown RBP17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 VPS35Q96QK1 796 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 RAD18Q9NS91 495 aa17.98■□□□□ 0.47
PRPF40B-208ENST00000548436 SLC5A10A0PJK1 596 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 SOBPA7XYQ1 873 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 H0YAE9 185 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 CST1P01037 141 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 CYP17A1P05093 508 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 ELFN1P0C7U0 828 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 ACPPP15309 386 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 HOXA9P31269 272 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 BDKRB1P46663 353 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 DGKGP49619 791 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 METAP1P53582 386 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 TMEM115Q12893 351 aaPredicted RBP17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 SLC14A1Q13336 389 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 DYNC1I2Q13409 638 aaKnown RBP17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 NAE1Q13564 534 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 CAMK1Q14012 370 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 DOC2AQ14183 400 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 MAP7Q14244 749 aa17.97■□□□□ 0.47
PRPF40B-208ENST00000548436 ACOX1Q15067 660 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms