RNA–Protein interactions for RNA: ENST00000547706.1

RPAP3-204, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 420 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-204	ENST00000547706	RIBC1	Q8N443	379 aa	Predicted RBP	13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	C19orf47	Q8N9M1	422 aa	Known RBP	13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	OR2A1	Q8NGT9	310 aa		13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	ACMSD	Q8TDX5	336 aa		13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	FGF11	Q92914	225 aa		13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	MRRF	Q96E11	262 aa	Known RBP	13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	MIPEP	Q99797	713 aa		13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	HAUS8	Q9BT25	410 aa		13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	OCIAD1	Q9NX40	245 aa		13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	PISD	Q9UG56	409 aa		13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	MDC1	Q14676	2089 aa	Known RBP	13.6	□□□□□ -0.23
RPAP3-204	ENST00000547706	ACACA	Q13085	2346 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	SEC16A	O15027	2179 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	SYCE1L	A8MT33	242 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	TRIM49D1	C9J1S8	452 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	CDH16	O75309	829 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	KLHL2	O95198	593 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	CAPNS1	P04632	268 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	CCL4	P13236	92 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	ST6GAL1	P15907	406 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	GCA	P28676	217 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	HSD17B3	P37058	310 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	CYP4F3	Q08477	520 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	TSN	Q15631	228 aa	Known RBP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	LCTL	Q6UWM7	567 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	ISCA2	Q86U28	154 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	GPSM1	Q86YR5	675 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	KDF1	Q8NAX2	398 aa	Predicted RBP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	OR2L3	Q8NG85	312 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	OR56A3	Q8NH54	315 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	SNIP1	Q8TAD8	396 aa	Known RBP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	UHMK1	Q8TAS1	419 aa	Known RBP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	SGPP1	Q9BX95	441 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	CNOT10	Q9H9A5	744 aa	Known RBP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	ENAM	Q9NRM1	1142 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	SOHLH2	Q9NX45	425 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	RARRES3	Q9UL19	164 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	SNX7	Q9UNH6	387 aa		13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706		V9GYY5	206 aa	Predicted RBP	13.59	□□□□□ -0.23
RPAP3-204	ENST00000547706	SPTB	P11277	2137 aa		13.58	□□□□□ -0.23
RPAP3-204	ENST00000547706	NPEPPSL1	A6NEC2	478 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	CDC7	O00311	574 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	KERA	O60938	352 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	ERLIN1	O75477	346 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	IPO13	O94829	963 aa	Known RBP	13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	RBP1	P09455	135 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	ITIH1	P19827	911 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	SLC5A2	P31639	672 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	GGT5	P36269	586 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	PGGT1B	P53609	377 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	MAPK10	P53779	464 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	BMPR2	Q13873	1038 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	FASTK	Q14296	549 aa	Known RBP	13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	TGFBI	Q15582	683 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	ICE2	Q659A1	982 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	SULT1C3	Q6IMI6	304 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	FOXR1	Q6PIV2	292 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	FIGLA	Q6QHK4	219 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	PPP1R3B	Q86XI6	285 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	KLHDC8A	Q8IYD2	350 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	PDPR	Q8NCN5	879 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	USP7	Q93009	1102 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	TSNARE1	Q96NA8	513 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	NRTN	Q99748	197 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	CAPS2	Q9BXY5	557 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	MRPS30	Q9NP92	439 aa	Known RBP	13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	FGF21	Q9NSA1	209 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	IGSF5	Q9NSI5	407 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	CIDEB	Q9UHD4	219 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	SERTAD3	Q9UJW9	196 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	TMCO1	Q9UM00	188 aa		13.58	□□□□□ -0.24
RPAP3-204	ENST00000547706	URB1	O60287	2271 aa	Known RBP	13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	AHCTF1	Q8WYP5	2266 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	SDK2	Q58EX2	2172 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	CCDC151	A5D8V7	595 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	SRPX2	O60687	465 aa	Predicted RBP	13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	MT-ND3	P03897	115 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	HGF	P14210	728 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	TFEB	P19484	476 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	ETV5	P41161	510 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	GRIA3	P42263	894 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	PCBP4	P57723	403 aa	Known RBP	13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	FOXM1	Q08050	763 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	TUBB3	Q13509	450 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	NAE1	Q13564	534 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	MAP7	Q14244	749 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	THEMIS2	Q5TEJ8	643 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	PRAMEF13	Q5VWM6	474 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	KIAA1614	Q5VZ46	1190 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	METTL2B	Q6P1Q9	378 aa	Known RBP	13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	CROCCP2	Q86T23	111 aa		13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	CENPL	Q8N0S6	344 aa	Predicted RBP	13.57	□□□□□ -0.24
RPAP3-204	ENST00000547706	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms