RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 OR2A1Q8NGT9 310 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 MAIP1Q8WWC4 291 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 INPP5DQ92835 1189 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 MESP1Q9BRJ9 268 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 RAB11FIP5Q9BXF6 653 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 MRM3Q9HC36 420 aaKnown RBP13.7□□□□□ -0.22
TROAP-203ENST00000546735 SLC6A20Q9NP91 592 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 ATP13A2Q9NQ11 1180 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 ASF1BQ9NVP2 202 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 CTSFQ9UBX1 484 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 FBXL4Q9UKA2 621 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 SOX13Q9UN79 622 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 ZKSCAN5Q9Y2L8 839 aa13.7□□□□□ -0.22
TROAP-203ENST00000546735 LOC105369274A0A096LPK9 316 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 LOC102723532A0A0G2JNH3 316 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 AP3B1O00203 1094 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 SOCS6O14544 535 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 KPNA5O15131 536 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 IGHEP01854 428 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 ALPPP05187 535 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 EIF2S1P05198 315 aaKnown RBP13.69□□□□□ -0.22
TROAP-203ENST00000546735 CCDC175P0C221 793 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 CHRM3P20309 590 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 MMP11P24347 488 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 CCNFP41002 786 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 TYSND1Q2T9J0 566 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 ACSBG2Q5FVE4 666 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.69□□□□□ -0.22
TROAP-203ENST00000546735 TCTE1Q5JU00 501 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 MRNIPQ6NTE8 343 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 PARP9Q8IXQ6 854 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 IQCKQ8N0W5 287 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 OR4N4Q8N0Y3 316 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 RAB42Q8N4Z0 105 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 PRR7Q8TB68 274 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 HMGCLL1Q8TB92 370 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 ZUFSPQ96AP4 578 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 FKBP10Q96AY3 582 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 FOPNLQ96NB1 174 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 ZNF285Q96NJ3 590 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 ZC3H7BQ9UGR2 993 aaKnown RBP13.69□□□□□ -0.22
TROAP-203ENST00000546735 B3GNT3Q9Y2A9 372 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 CSAG2Q9Y5P2 127 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 HS3ST3B1Q9Y662 390 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 LRRK2Q5S007 2527 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 CCDC88CQ9P219 2028 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 SHANK1Q9Y566 2161 aa13.69□□□□□ -0.22
TROAP-203ENST00000546735 HYKKA2RU49 373 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 FITM1A5D6W6 292 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 ARHGEF33A8MVX0 844 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 TARM1B6A8C7 271 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 ONECUT2O95948 504 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 ALBP02768 609 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 PIM1P11309 404 aaPredicted RBP13.68□□□□□ -0.22
TROAP-203ENST00000546735 SOX8P57073 446 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 GPS1Q13098 491 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 AIMP2Q13155 320 aaKnown RBP13.68□□□□□ -0.22
TROAP-203ENST00000546735 TSTA3Q13630 321 aaPredicted RBP13.68□□□□□ -0.22
TROAP-203ENST00000546735 GBX1Q14549 363 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 KCNJ11Q14654 390 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 NR6A1Q15406 480 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 HIF1AQ16665 826 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 YOD1Q5VVQ6 348 aaPredicted RBP13.68□□□□□ -0.22
TROAP-203ENST00000546735 KIAA0930Q6ICG6 404 aaPredicted RBP13.68□□□□□ -0.22
TROAP-203ENST00000546735 TTC27Q6P3X3 843 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 CASC4Q6P4E1 433 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 SUSD1Q6UWL2 747 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 KIRREL2Q6UWL6 708 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 IGFL3Q6UXB1 125 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 ZNF662Q6ZS27 426 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 CENPUQ71F23 418 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 PRSS58Q8IYP2 241 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 ZADH2Q8N4Q0 377 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 SSC4DQ8WTU2 575 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 SLC30A3Q99726 388 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 SLC29A3Q9BZD2 475 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 ILKAPQ9H0C8 392 aaPredicted RBP13.68□□□□□ -0.22
TROAP-203ENST00000546735 SLC26A1Q9H2B4 701 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 WDR54Q9H977 334 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 SYNPO2LQ9H987 977 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 SPATA7Q9P0W8 599 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 NTNG1Q9Y2I2 539 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 MRFAP1Q9Y605 127 aa13.68□□□□□ -0.22
TROAP-203ENST00000546735 NAV2Q8IVL1 2488 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 A1L4Q6 167 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 GOLGA8MH3BSY2 632 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 SRPX2O60687 465 aaPredicted RBP13.67□□□□□ -0.22
TROAP-203ENST00000546735 FKBP9O95302 570 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 MATN4O95460 622 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 KRT14P02533 472 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 ESR1P03372 595 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 PKMP14618 531 aaKnown RBP13.67□□□□□ -0.22
TROAP-203ENST00000546735 OGNP20774 298 aaKnown RBP13.67□□□□□ -0.22
TROAP-203ENST00000546735 GLRBP48167 497 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 CDK16Q00536 496 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 RBBP7Q16576 425 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 KLHL38Q2WGJ6 581 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 FAM214AQ32MH5 1076 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 C4orf17Q53FE4 359 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms