RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RNASEH1O60930 286 aaKnown RBP11.6□□□□□ -0.55
CCDC38-202ENST00000546386 C1orf105O95561 183 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 ABCB1P08183 1280 aaPredicted RBP11.6□□□□□ -0.55
CCDC38-202ENST00000546386 ATP6V1B2P21281 511 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 PLEKHS1Q5SXH7 462 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 NANOGP8Q6NSW7 305 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 WASH2PQ6VEQ5 465 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 DGLUCYQ7Z3D6 616 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 ICA1LQ8NDH6 482 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 CANT1Q8WVQ1 401 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 RNF31Q96EP0 1072 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 LRIG1Q96JA1 1093 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 NANOGQ9H9S0 305 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 PRDM8Q9NQV8 689 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 DNAJC11Q9NVH1 559 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 LMCD1Q9NZU5 365 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 CD207Q9UJ71 328 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 SNRNP200O75643 2136 aaKnown RBP11.6□□□□□ -0.55
CCDC38-202ENST00000546386 GRXCR2A6NFK2 248 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 ACOT8O14734 319 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 PAPLNO95428 1278 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 EML2O95834 649 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 PRDX6P30041 224 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 CDKN2CP42773 168 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 GNPDA1P46926 289 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 DCDC1P59894 354 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 DSG4Q86SJ6 1040 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 KBTBD6Q86V97 674 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 THUMPD3Q9BV44 507 aaKnown RBP11.59□□□□□ -0.55
CCDC38-202ENST00000546386 TRPV4Q9HBA0 871 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 SMOXQ9NWM0 555 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 GPRC5BQ9NZH0 403 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 UTS2RQ9UKP6 389 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 PNMA8BQ9ULN7 279 aaPredicted RBP11.59□□□□□ -0.55
CCDC38-202ENST00000546386 NUP210Q8TEM1 1887 aaPredicted RBP11.59□□□□□ -0.55
CCDC38-202ENST00000546386 PEX1O43933 1283 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 DNTTP04053 509 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 C8GP07360 202 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 EBLN1P0CF75 366 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 PRR35P0CG20 571 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 ZCCHC18P0CG32 403 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 CKMT2P17540 419 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 OR4D2P58180 307 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 MC1RQ01726 317 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 GTF2H3Q13889 308 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 TRIM25Q14258 630 aaKnown RBP11.59□□□□□ -0.55
CCDC38-202ENST00000546386 MTX3Q5HYI7 312 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 ZDHHC20Q5W0Z9 365 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 FRG2Q64ET8 278 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 ADCK2Q7Z695 626 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 AMZ2Q86W34 360 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 SLC44A3Q8N4M1 653 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 SMRP1Q8NCR6 262 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 TFGQ92734 400 aaPredicted RBP11.59□□□□□ -0.55
CCDC38-202ENST00000546386 SH3KBP1Q96B97 665 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 FOPNLQ96NB1 174 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 FRG2BQ96QU4 278 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 SERPINI1Q99574 410 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 DPY30Q9C005 99 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 WDR26Q9H7D7 661 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 CUEDC1Q9NWM3 386 aaPredicted RBP11.59□□□□□ -0.55
CCDC38-202ENST00000546386 C5AR2Q9P296 337 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 TAC3Q9UHF0 121 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 ERVK-11Q9UQG0 969 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 BTBD3Q9Y2F9 522 aa11.59□□□□□ -0.55
CCDC38-202ENST00000546386 TTC28Q96AY4 2481 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 A0A1W2PP18 115 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 PDZK1P1A8MUH7 402 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 PDLIM1O00151 329 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 RGS14O43566 566 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 WFS1O76024 890 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 CATP04040 527 aaKnown RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 NPPBP16860 134 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 NTSR1P30989 418 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 VHLP40337 213 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 SLC6A12P48065 614 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 HTR4Q13639 388 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 RCAN2Q14206 197 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 GBX1Q14549 363 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 HKDC1Q2TB90 917 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 OR4F3Q6IEY1 312 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 ANO7Q6IWH7 933 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 SLC30A9Q6PML9 568 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 GCNT7Q6ZNI0 430 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 DHDDSQ86SQ9 333 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 ZNF761Q86XN6 746 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 SHISA5Q8N114 240 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 OR10A6Q8NH74 314 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 HUS1BQ8NHY5 278 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 MIEF2Q96C03 454 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 SIPA1Q96FS4 1042 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 NAF1Q96HR8 494 aaKnown RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 RIPOR3Q96MK2 946 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 OR52E6Q96RD3 313 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 TPSD1Q9BZJ3 242 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 ZDHHC5Q9C0B5 715 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 RSPH9Q9H1X1 276 aaPredicted RBP11.58□□□□□ -0.56
CCDC38-202ENST00000546386 TCRBV21S2A2A0A5A6 115 aa11.58□□□□□ -0.56
CCDC38-202ENST00000546386 H7BY64 318 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms