RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MC2RQ01718 297 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 TGFBIQ15582 683 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 GPSM1Q86YR5 675 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 OR2L3Q8NG85 312 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 ATL1Q8WXF7 558 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 GPR78Q96P69 363 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 MIPEPQ99797 713 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 KLHL25Q9H0H3 589 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 ATG10Q9H0Y0 220 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 ALG9Q9H6U8 611 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 AK5Q9Y6K8 562 aa19.74■□□□□ 0.75
HMGA2-211ENST00000545998 SPTBP11277 2137 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 APC2O95996 2303 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 ACACAQ13085 2346 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 BRINP1O60477 761 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 PRAMEF10O60809 474 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 TNFSF15O95150 251 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 KCNC1P48547 511 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 ARL4DP49703 201 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 TBPL1P62380 186 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 TSTA3Q13630 321 aaPredicted RBP19.73■□□□□ 0.75
HMGA2-211ENST00000545998 KCNAB1Q14722 419 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 ZIC1Q15915 447 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 KIAA1614Q5VZ46 1190 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 LSMEM2Q8N112 164 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 PLD6Q8N2A8 252 aaKnown RBP19.73■□□□□ 0.75
HMGA2-211ENST00000545998 C19orf47Q8N9M1 422 aaKnown RBP19.73■□□□□ 0.75
HMGA2-211ENST00000545998 OR56A3Q8NH54 315 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 STAG3L4Q8TBR4 150 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 ACAT2Q9BWD1 397 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 ASCL3Q9NQ33 180 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 CCDC177Q9NQR7 707 aaPredicted RBP19.73■□□□□ 0.75
HMGA2-211ENST00000545998 FBXO8Q9NRD0 319 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 SOHLH2Q9NX45 425 aa19.73■□□□□ 0.75
HMGA2-211ENST00000545998 AHCTF1Q8WYP5 2266 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 SMIM23A6NLE4 172 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 CTIFO43310 598 aaKnown RBP19.72■□□□□ 0.75
HMGA2-211ENST00000545998 CDH16O75309 829 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 ANXA5P08758 320 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 EBLN1P0CF75 366 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 COL6A2P12110 1019 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 FOLR1P15328 257 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 MLLT3P42568 568 aaPredicted RBP19.72■□□□□ 0.75
HMGA2-211ENST00000545998 MAPK10P53779 464 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 YBX1P67809 324 aaKnown RBP19.72■□□□□ 0.75
HMGA2-211ENST00000545998 NAE1Q13564 534 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 ACAP2Q15057 778 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 CLEC14AQ86T13 490 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 CYP4X1Q8N118 509 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 RHEBL1Q8TAI7 183 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 MED8Q96G25 268 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 CABS1Q96KC9 395 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 ATOH8Q96SQ7 321 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 SGPP1Q9BX95 441 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 CHRNA10Q9GZZ6 450 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 PDE7BQ9NP56 450 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 SLC39A1Q9NY26 324 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 TAC3Q9UHF0 121 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 RNF112Q9ULX5 631 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 KLHL20Q9Y2M5 609 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 KLK4Q9Y5K2 254 aa19.72■□□□□ 0.75
HMGA2-211ENST00000545998 CCDC189A1A4V9 331 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 CCDC151A5D8V7 595 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 CDRT15L2A8MXV6 281 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 KERAO60938 352 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 MAGP20916 626 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 CCND1P24385 295 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 RBMS1P29558 406 aaKnown RBP19.71■□□□□ 0.75
HMGA2-211ENST00000545998 GRIA3P42263 894 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 HNMTP50135 292 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 PRDX1Q06830 199 aaKnown RBP19.71■□□□□ 0.75
HMGA2-211ENST00000545998 CYP4F3Q08477 520 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 CDKL4Q5MAI5 379 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 KLC3Q6P597 504 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 PMEPA1Q969W9 287 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 RHBDF1Q96CC6 855 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 TCTN2Q96GX1 697 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 TAAR9Q96RI9 348 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 EGFL8Q99944 293 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 ZNF358Q9NW07 568 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 PLAAQ9Y263 795 aa19.71■□□□□ 0.75
HMGA2-211ENST00000545998 ANKRD11Q6UB99 2663 aaPredicted RBP19.71■□□□□ 0.75
HMGA2-211ENST00000545998 NCF1BA6NI72 391 aaPredicted RBP19.7■□□□□ 0.74
HMGA2-211ENST00000545998 NCF1CA8MVU1 366 aaPredicted RBP19.7■□□□□ 0.74
HMGA2-211ENST00000545998 ERLIN1O75477 346 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 CAPNS1P04632 268 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 MSL3P1P0C860 447 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 NCF1P14598 390 aaPredicted RBP19.7■□□□□ 0.74
HMGA2-211ENST00000545998 CMPK1P30085 196 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 GLRBP48167 497 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 RAB15P59190 212 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 FOXM1Q08050 763 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 IFFO1Q0D2I5 559 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 TMTC4Q5T4D3 741 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 THEMIS2Q5TEJ8 643 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 ICE2Q659A1 982 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 FCRL6Q6DN72 434 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 CAPN13Q6MZZ7 669 aaPredicted RBP19.7■□□□□ 0.74
HMGA2-211ENST00000545998 FIGLAQ6QHK4 219 aa19.7■□□□□ 0.74
HMGA2-211ENST00000545998 PDPRQ8NCN5 879 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms