RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SLC5A10A0PJK1 596 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 HYKKA2RU49 373 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 C5orf60A6NFR6 353 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 IDSB3KWA1 339 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 SLCO2B1O94956 709 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 ZRANB2O95218 330 aaKnown RBP eCLIP8.93□□□□□ -0.98
CHD4-212ENST00000545083 KRT1P04264 644 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 ZFXP17010 805 aaPredicted RBP8.93□□□□□ -0.98
CHD4-212ENST00000545083 MC4RP32245 332 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 ADRA1AP35348 466 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 EMP2P54851 167 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 ZNF33BQ06732 778 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 TFF3Q07654 80 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 GRB7Q14451 532 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 MESDQ14696 234 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 NFKBIBQ15653 356 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 KRTCAP3Q53RY4 240 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 ABHD17BQ5VST6 288 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 FCRLBQ6BAA4 426 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 MFSD7Q6UXD7 560 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 RANBP10Q6VN20 620 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 TMEM200AQ86VY9 491 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 VSIG1Q86XK7 387 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 SIAH3Q8IW03 269 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 PIANPQ8IYJ0 282 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 OR4N4Q8N0Y3 316 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 CA5BP1Q8WTZ4 195 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 DNAJC1Q96KC8 554 aaKnown RBP8.93□□□□□ -0.98
CHD4-212ENST00000545083 IMMP1LQ96LU5 166 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 C10orf90Q96M02 699 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 NAP1L5Q96NT1 182 aaPredicted RBP8.93□□□□□ -0.98
CHD4-212ENST00000545083 SIGLEC12Q96PQ1 595 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 FOXC2Q99958 501 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 TRIM51Q9BSJ1 452 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 FSD1LQ9BXM9 530 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 ZNF700Q9H0M5 742 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 VPS37BQ9H9H4 285 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 KLHL1Q9NR64 748 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 CCM2LQ9NUG4 571 aaPredicted RBP8.93□□□□□ -0.98
CHD4-212ENST00000545083 RIC8BQ9NVN3 520 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 STMN3Q9NZ72 180 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.93□□□□□ -0.98
CHD4-212ENST00000545083 PPT2Q9UMR5 302 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 LUC7L2Q9Y383 392 aaKnown RBP8.93□□□□□ -0.98
CHD4-212ENST00000545083 GTF3C1Q12789 2109 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 CSPG4Q6UVK1 2322 aa8.93□□□□□ -0.98
CHD4-212ENST00000545083 LOC102723996A0A087X1L8 192 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 ASPDHA6ND91 283 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 E9PLN8 166 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 LIN7AO14910 233 aaPredicted RBP8.92□□□□□ -0.98
CHD4-212ENST00000545083 ASNA1O43681 348 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 ABOP16442 354 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 FBLP22087 321 aaKnown RBP8.92□□□□□ -0.98
CHD4-212ENST00000545083 CXCR2P25025 360 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 ARHGAP25P42331 645 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 ALDH6A1Q02252 535 aaKnown RBP8.92□□□□□ -0.98
CHD4-212ENST00000545083 DBN1Q16643 649 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 FAM214AQ32MH5 1076 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 GPR33Q49SQ1 333 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 ZC3H12BQ5HYM0 836 aaKnown RBP8.92□□□□□ -0.98
CHD4-212ENST00000545083 TAS2R42Q7RTR8 314 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 DMRTC2Q8IXT2 367 aaPredicted RBP8.92□□□□□ -0.98
CHD4-212ENST00000545083 BEST3Q8N1M1 668 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 MARVELD2Q8N4S9 558 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 MDS2Q8NDY4 140 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 ELMO1Q92556 727 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 FRMD6Q96NE9 622 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 VKORC1Q9BQB6 163 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 UCK2Q9BZX2 261 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 C10orf88Q9H8K7 445 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 LUC7LQ9NQ29 371 aaKnown RBP8.92□□□□□ -0.98
CHD4-212ENST00000545083 ANO10Q9NW15 660 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 ANKRD10Q9NXR5 420 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 UVRAGQ9P2Y5 699 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 ZC3H7BQ9UGR2 993 aaKnown RBP8.92□□□□□ -0.98
CHD4-212ENST00000545083 RSPH14Q9UHP6 348 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 ASB1Q9Y576 335 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 BZW2Q9Y6E2 419 aaKnown RBP8.92□□□□□ -0.98
CHD4-212ENST00000545083 STAB1Q9NY15 2570 aa8.92□□□□□ -0.98
CHD4-212ENST00000545083 A0A0J9YVX5 310 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 A0A1B0GTH6 734 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 NKX2-6A6NCS4 301 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 FAM90A27PA6NNH2 459 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 A8MUI8 341 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 TTI1O43156 1089 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 MAN1A2O60476 641 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 CRTAMO95727 393 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 S1PR4O95977 384 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 GSTM1P09488 218 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 CD9P21926 228 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 PSMB5P28074 263 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 CDKN2BP42772 138 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 NR2C2P49116 596 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 CSE1LP55060 971 aaKnown RBP8.91□□□□□ -0.98
CHD4-212ENST00000545083 PPP2R2AP63151 447 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 GSTM4Q03013 218 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 LTBQ06643 244 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 TUBA3CQ13748 450 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 SF1Q15637 639 aaKnown RBP8.91□□□□□ -0.98
CHD4-212ENST00000545083 RNFT1Q5M7Z0 435 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms