RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ACTL8Q9H568 366 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 FGF22Q9HCT0 170 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 EIF3LQ9Y262 564 aaKnown RBP19.21■□□□□ 0.67
COPS7A-218ENST00000543939 WDR37Q9Y2I8 494 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 PLEKHM1Q9Y4G2 1056 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 PRUNE2Q8WUY3 3088 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 FAM234BA2RU67 622 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 H0YIV9 168 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 CFLARO15519 480 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 SEC22BO75396 215 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 SORBS2O94875 1100 aaKnown RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 SEMA4FO95754 770 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 ERGP11308 486 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 RPL10P27635 214 aaKnown RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 ACTR3P61158 418 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 PSME3P61289 254 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 NFATC4Q14934 902 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 KIAA0040Q15053 153 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 PIGGQ5H8A4 983 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 COQ5Q5HYK3 327 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 C1orf146Q5VVC0 180 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 HPS6Q86YV9 775 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 PGBD3Q8N328 593 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 LMNTD1Q8N9Z9 388 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 PCYOX1LQ8NBM8 494 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 SPDL1Q96EA4 605 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 WDR34Q96EX3 536 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 SERPINI1Q99574 410 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 LMAN1LQ9HAT1 526 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 RNPEPL1Q9HAU8 725 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 MAP10Q9P2G4 905 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 MOSPD1Q9UJG1 213 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 KCNK6Q9Y257 313 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 CA5BQ9Y2D0 317 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 GPSM3Q9Y4H4 160 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 CFAP20Q9Y6A4 193 aaKnown RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 PRSS38A1L453 326 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 CCND1P24385 295 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 POLR2JP52435 117 aaKnown RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 KCNK10P57789 538 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 MLLT1Q03111 559 aaPredicted RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 ARHGAP19Q14CB8 494 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 HABP4Q5JVS0 413 aaKnown RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 TBC1D21Q8IYX1 336 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 SETD7Q8WTS6 366 aaKnown RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 ROPN1LQ96C74 230 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 IL17FQ96PD4 163 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 INSM2Q96T92 566 aaPredicted RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 TRIT1Q9H3H1 467 aaKnown RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 OSGEPL1Q9H4B0 414 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 CCDC177Q9NQR7 707 aaPredicted RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 PLAGL1Q9UM63 463 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 SH2B3Q9UQQ2 575 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 TDRKHQ9Y2W6 561 aaKnown RBP19.2■□□□□ 0.66
COPS7A-218ENST00000543939 DYRK1BQ9Y463 629 aa19.2■□□□□ 0.66
COPS7A-218ENST00000543939 A0A1W2PP18 115 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 H0Y8X5 98 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 ANGPT2O15123 496 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 PI15O43692 258 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 VARSP26640 1264 aaKnown RBP19.19■□□□□ 0.66
COPS7A-218ENST00000543939 CSTF3Q12996 717 aaKnown RBP19.19■□□□□ 0.66
COPS7A-218ENST00000543939 PRKG2Q13237 762 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 LRRC32Q14392 662 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 PUS10Q3MIT2 529 aaKnown RBP19.19■□□□□ 0.66
COPS7A-218ENST00000543939 CMTM7Q96FZ5 175 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 MENTQ9BUN1 341 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 EBF2Q9HAK2 575 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 C2orf42Q9NWW7 574 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 CROTQ9UKG9 612 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 POMPQ9Y244 141 aa19.19■□□□□ 0.66
COPS7A-218ENST00000543939 ASPDHA6ND91 283 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 APBB3O95704 486 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 LMNAP02545 664 aaKnown RBP19.18■□□□□ 0.66
COPS7A-218ENST00000543939 JAK1P23458 1154 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 HSD17B2P37059 387 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 THOP1P52888 689 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 FZD5Q13467 585 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 TSTA3Q13630 321 aaPredicted RBP19.18■□□□□ 0.66
COPS7A-218ENST00000543939 CEACAM7Q14002 265 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 GAS6Q14393 721 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 CYP2A13Q16696 494 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 ZNF423Q2M1K9 1284 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 TPRG1LQ5T0D9 272 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 DUS1LQ6P1R4 473 aaKnown RBP19.18■□□□□ 0.66
COPS7A-218ENST00000543939 SUSD1Q6UWL2 747 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 LAYNQ6UX15 382 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 GCNT7Q6ZNI0 430 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 TMPRSS11BQ86T26 416 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 ENDOVQ8N8Q3 282 aaKnown RBP19.18■□□□□ 0.66
COPS7A-218ENST00000543939 OR1E3Q8WZA6 343 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 C12orf66Q96MD2 445 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 WDR92Q96MX6 357 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 OR2M4Q96R27 311 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 SPATA7Q9P0W8 599 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 NKX1-2Q9UD57 310 aaPredicted RBP19.18■□□□□ 0.66
COPS7A-218ENST00000543939 PACSIN3Q9UKS6 424 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 PCDHGA11Q9Y5H2 935 aa19.18■□□□□ 0.66
COPS7A-218ENST00000543939 EEDO75530 441 aaKnown RBP19.17■□□□□ 0.66
COPS7A-218ENST00000543939 IDSP22304 550 aa19.17■□□□□ 0.66
COPS7A-218ENST00000543939 AKT2P31751 481 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms