RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 RFPL1O75677 317 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 TNFSF15O95150 251 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 UQCRHP07919 91 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 GSTA1P08263 222 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 EBLN1P0CF75 366 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 HGFP14210 728 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 PVRP15151 417 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 ST6GAL1P15907 406 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 KRT4P19013 534 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 ITIH1P19827 911 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 TAC1P20366 129 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 MAGP20916 626 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 PEBP1P30086 187 aaKnown RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 ARL1P40616 181 aaPredicted RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 CCT5P48643 541 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 HSPA7P48741 367 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 HNMTP50135 292 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 PDX1P52945 283 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 HSD11B2P80365 405 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 CDKL1Q00532 357 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 ACY1Q03154 408 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 TAP2Q03519 686 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 CYP2A13Q16696 494 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 PPP1R3AQ16821 1122 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 ICE2Q659A1 982 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 SULT1C3Q6IMI6 304 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 SBSNQ6UWP8 590 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 TIFABQ6ZNK6 161 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 ARHGAP22Q7Z5H3 698 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 ISCA2Q86U28 154 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 C17orf64Q86WR6 236 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 KMT5CQ86Y97 462 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 RASGRP3Q8IV61 690 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 SRRM1Q8IYB3 904 aaKnown RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 CENPLQ8N0S6 344 aaPredicted RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 CYP4X1Q8N118 509 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 CARFQ8N187 725 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 C4orf33Q8N1A6 199 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 CACTIN-AS1Q8N1I8 211 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 PLD6Q8N2A8 252 aaKnown RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 TBC1D19Q8N5T2 526 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 GOLGA6L1Q8N7Z2 621 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 C19orf47Q8N9M1 422 aaKnown RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 SNX31Q8N9S9 440 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 RHEBL1Q8TAI7 183 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 HMGCLL1Q8TB92 370 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 ACMSDQ8TDX5 336 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 HNRNPLLQ8WVV9 542 aaKnown RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 PTERQ96BW5 349 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 PYCR2Q96C36 320 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 NXPE2Q96DL1 559 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 TCTN2Q96GX1 697 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 PPM1MQ96MI6 270 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 TRAPPC9Q96Q05 1148 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 OR6C1Q96RD1 312 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 SMC6Q96SB8 1091 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 CTRCQ99895 268 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 HAUS8Q9BT25 410 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 PCBD2Q9H0N5 130 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 STMN4Q9H169 189 aaPredicted RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 MRPL46Q9H2W6 279 aaKnown RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 POLR1BQ9H9Y6 1135 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 IGSF5Q9NSI5 407 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 ZNF358Q9NW07 568 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 OCIAD1Q9NX40 245 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 XPR1Q9UBH6 696 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 DCDC2Q9UHG0 476 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 TMCO1Q9UM00 188 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 KLHL20Q9Y2M5 609 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 MSRB2Q9Y3D2 182 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 ANKRD12Q6UB98 2062 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 GOLGA4Q13439 2230 aaKnown RBP6.09□□□□□ -1.44
LTBR-212ENST00000543542 UNC13CQ8NB66 2214 aa6.09□□□□□ -1.44
LTBR-212ENST00000543542 GVINP1Q7Z2Y8 2422 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 PCM1Q15154 2024 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 CCDC189A1A4V9 331 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 TRABD2BA6NFA1 517 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 FOXO6A8MYZ6 492 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 TMEM150CB9EJG8 249 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 H2AFYO75367 372 aaKnown RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 STK16O75716 305 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 IPO13O94829 963 aaKnown RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 FKBP9O95302 570 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 WISP3O95389 354 aaPredicted RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 EIF2S1P05198 315 aaKnown RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 ANKRD34CP0C6C1 535 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ATXN8OSP0DMR3 200 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ERGP11308 486 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 FGF3P11487 239 aaPredicted RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 CCL4P13236 92 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 NELFEP18615 380 aaKnown RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 GRK3P35626 688 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 GRIA3P42263 894 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 MAGEA12P43365 314 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 RAB15P59190 212 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 SH3BP2P78314 561 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 ABATP80404 500 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 PRDX1Q06830 199 aaKnown RBP6.08□□□□□ -1.44
LTBR-212ENST00000543542 ZNF844Q08AG5 666 aa6.08□□□□□ -1.44
LTBR-212ENST00000543542 TUBB3Q13509 450 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms