RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 EFR3BQ9Y2G0 817 aa17.01■□□□□ 0.31
CLSTN3-214ENST00000542663 SETD2Q9BYW2 2564 aaPredicted RBP17.01■□□□□ 0.31
CLSTN3-214ENST00000542663 TRGV8A0A0C4DH27 118 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 CCDC162PA2VCL2 907 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 MAP2K7O14733 419 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 NRP2O60462 931 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 METTL18O95568 372 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 MST1P26927 711 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
CLSTN3-214ENST00000542663 CARSP49589 748 aaKnown RBP17■□□□□ 0.31
CLSTN3-214ENST00000542663 VSX2P58304 361 aaPredicted RBP17■□□□□ 0.31
CLSTN3-214ENST00000542663 SF1Q15637 639 aaKnown RBP17■□□□□ 0.31
CLSTN3-214ENST00000542663 FAM214AQ32MH5 1076 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 WASHC2DQ5SRD0 308 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 LAPTM4BQ86VI4 370 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 VSTM4Q8IW00 320 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 PRSS58Q8IYP2 241 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 ZNF808Q8N4W9 903 aaPredicted RBP17■□□□□ 0.31
CLSTN3-214ENST00000542663 SIRT6Q8N6T7 355 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 LKAAEAR1Q8TD35 194 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 HAS2Q92819 552 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 OSBPL8Q9BZF1 889 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 ZNF304Q9HCX3 659 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 INTS7Q9NVH2 962 aaKnown RBP17■□□□□ 0.31
CLSTN3-214ENST00000542663 C3orf18Q9UK00 162 aa17■□□□□ 0.31
CLSTN3-214ENST00000542663 CCDC168Q8NDH2 2452 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 IGLV3-12A0A075B6K2 115 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 TRAV17A0A0B4J275 112 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 DYTNA2CJ06 578 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 HYKKA2RU49 373 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 CCL21O00585 134 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 GPC4O75487 556 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 USP1O94782 785 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 UNC5CO95185 931 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 F10P00742 488 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 CELA2AP08217 269 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 PSMB5P28074 263 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 CTNNA1P35221 906 aaKnown RBP16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 PTPN7P35236 360 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 CA7P43166 264 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 HSPA14Q0VDF9 509 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 VWA2Q5GFL6 755 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 AADACL2Q6P093 401 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 ARHGEF18Q6ZSZ5 1173 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 NDUFAF7Q7L592 441 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 DCUN1D3Q8IWE4 304 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 ZNF295-AS1Q8N0V1 137 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 AMER2Q8N7J2 671 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 CFAP61Q8NHU2 1237 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 MIEF2Q96C03 454 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 LRRC40Q9H9A6 602 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 CHST11Q9NPF2 352 aa16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 STOX2Q9P2F5 926 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 SUCOQ9UBS9 1254 aaKnown RBP16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 ZNF282Q9UDV7 671 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-214ENST00000542663 ZFHX3Q15911 3703 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 LOC105369274A0A096LPK9 316 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 NSG1A0A0A6YYJ2 146 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 LOC102723532A0A0G2JNH3 316 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 A0A1W2PQ72 361 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 TARM1B6A8C7 271 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 RASGRF2O14827 1237 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 SRPX2O60687 465 aaPredicted RBP16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 WISP2O76076 250 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 CTNNA2P26232 953 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 MAGEA1P43355 309 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 OCA2Q04671 838 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 PARP6Q2NL67 630 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 CCDC38Q502W7 563 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 TMEM207Q6UWW9 146 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 UNC5DQ6UXZ4 953 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 OR4N4Q8N0Y3 316 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 OR13J1Q8NGT2 312 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 ZUFSPQ96AP4 578 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 LRRC45Q96CN5 670 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 ABI3Q9P2A4 366 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 MRPS2Q9Y399 296 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 PCDHA3Q9Y5H8 950 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 KLK4Q9Y5K2 254 aa16.98■□□□□ 0.31
CLSTN3-214ENST00000542663 IGHV1-45A0A0A0MS14 117 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 KRT87PA6NCN2 255 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 IQCF5A8MTL0 148 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 WDPCPO95876 746 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 COX6B1P14854 86 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 SEMA3AQ14563 771 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 PRMT9Q6P2P2 845 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 C10orf90Q96M02 699 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 SLC2A6Q9UGQ3 507 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 ZC3H7BQ9UGR2 993 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 SH3BGRL2Q9UJC5 107 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 NF1P21359 2839 aa16.97■□□□□ 0.31
CLSTN3-214ENST00000542663 A0A0J9YVX5 310 aa16.96■□□□□ 0.31
CLSTN3-214ENST00000542663 FKBP9O95302 570 aa16.96■□□□□ 0.31
CLSTN3-214ENST00000542663 BMP10O95393 424 aa16.96■□□□□ 0.31
CLSTN3-214ENST00000542663 RPN2P04844 631 aa16.96■□□□□ 0.31
CLSTN3-214ENST00000542663 SERPINA7P05543 415 aa16.96■□□□□ 0.31
CLSTN3-214ENST00000542663 FDXRP22570 491 aa16.96■□□□□ 0.31
CLSTN3-214ENST00000542663 GDF10P55107 478 aa16.96■□□□□ 0.31
CLSTN3-214ENST00000542663 YBX1P67809 324 aaKnown RBP16.96■□□□□ 0.31
CLSTN3-214ENST00000542663 ADORA2A-AS1P86434 159 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms