RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PABPN1LA6NDY0 278 aaKnown RBP14.94□□□□□ -0.02
CNOT9-208ENST00000542068 M0R129 80 aa14.94□□□□□ -0.02
CNOT9-208ENST00000542068 VNN2O95498 520 aa14.94□□□□□ -0.02
CNOT9-208ENST00000542068 ITIH1P19827 911 aa14.94□□□□□ -0.02
CNOT9-208ENST00000542068 MAGEA11P43364 429 aa14.94□□□□□ -0.02
CNOT9-208ENST00000542068 CLK3P49761 638 aaKnown RBP14.94□□□□□ -0.02
CNOT9-208ENST00000542068 ADGRF1Q5T601 910 aa14.94□□□□□ -0.02
CNOT9-208ENST00000542068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.94□□□□□ -0.02
CNOT9-208ENST00000542068 TTC29Q8NA56 475 aaPredicted RBP14.94□□□□□ -0.02
CNOT9-208ENST00000542068 CNDP2Q96KP4 475 aaKnown RBP14.94□□□□□ -0.02
CNOT9-208ENST00000542068 C1orf109Q9NX04 203 aa14.94□□□□□ -0.02
CNOT9-208ENST00000542068 CDH23Q9H251 3354 aa14.94□□□□□ -0.02
CNOT9-208ENST00000542068 RPLP2P05387 115 aaKnown RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 BCKDHAP12694 445 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 TUFMP49411 452 aaKnown RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 EPS8Q12929 822 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 BOP1Q14137 746 aaKnown RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 OR4F3Q6IEY1 312 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 SBSNQ6UWP8 590 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 ANGPTL8Q6UXH0 198 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 ZNF621Q6ZSS3 439 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 SVOPLQ8N434 492 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 WFDC5Q8TCV5 224 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 PROX1Q92786 737 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 LGALS12Q96DT0 336 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 CASD1Q96PB1 797 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 MGME1Q9BQP7 344 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 GORASP2Q9H8Y8 452 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 DCAF13Q9NV06 445 aaKnown RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 DNMT3BQ9UBC3 853 aaKnown RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 ARIH1Q9Y4X5 557 aaPredicted RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 A0A096LPI6 279 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 ARNTLO00327 626 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 TAPBPO15533 448 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 DNTTP04053 509 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 NTRK1P04629 796 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 ABCB1P08183 1280 aaPredicted RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 ALOX12P18054 663 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 C21orf33P30042 268 aaPredicted RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 DAPP51397 102 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 ARHGDIAP52565 204 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 RAB15P59190 212 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 ARF5P84085 180 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 SPATS1Q496A3 300 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 HS6ST3Q8IZP7 471 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 APCDD1Q8J025 514 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 PIK3C3Q8NEB9 887 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 TADA1Q96BN2 335 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 PYURFQ96I23 114 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 NUDT4Q9NZJ9 180 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 TPRKBQ9Y3C4 175 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 GON4LQ3T8J9 2241 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 EFCAB9A8MZ26 197 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 AREL1O15033 823 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 RGS10O43665 173 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 KDELR3O43731 214 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 SCELO95171 688 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 HPRP00739 348 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 EPOP01588 193 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 PABPC1P11940 636 aaKnown RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 CD6P30203 668 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 TOP3AQ13472 1001 aaPredicted RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 MADCAM1Q13477 382 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 IRF5Q13568 498 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 TP53BP2Q13625 1128 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 SF3B4Q15427 424 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■■■□□ 16.5
CNOT9-208ENST00000542068 C1QTNF12Q5T7M4 302 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 PLEKHG7Q6ZR37 379 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 HEATR4Q86WZ0 1026 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 FAM83FQ8NEG4 500 aaPredicted RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 OR52J3Q8NH60 311 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 SELENOMQ8WWX9 145 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 REXO5Q96IC2 774 aaKnown RBP14.93□□□□□ -0.02
CNOT9-208ENST00000542068 APOLD1Q96LR9 279 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 RUBCNLQ9H714 662 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 B3GNT3Q9Y2A9 372 aa14.93□□□□□ -0.02
CNOT9-208ENST00000542068 CLCN7P51798 805 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 PDE12Q6L8Q7 609 aaKnown RBP14.92□□□□□ -0.02
CNOT9-208ENST00000542068 MFSD4AQ8N468 514 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 KCNC2Q96PR1 638 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 KAT8Q9H7Z6 458 aaKnown RBP14.92□□□□□ -0.02
CNOT9-208ENST00000542068 ZFYVE1Q9HBF4 777 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 TNFRSF1BP20333 461 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 STK19P49842 368 aaPredicted RBP14.92□□□□□ -0.02
CNOT9-208ENST00000542068 MVKQ03426 396 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 BCL2L1Q07817 233 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 CBX2Q14781 532 aaPredicted RBP14.92□□□□□ -0.02
CNOT9-208ENST00000542068 CYP27C1Q4G0S4 372 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 RUNDC3AQ59EK9 446 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 CCSAPQ6IQ19 270 aaPredicted RBP14.92□□□□□ -0.02
CNOT9-208ENST00000542068 SPATC1Q76KD6 591 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 ADAMTSL2Q86TH1 951 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 NPAS4Q8IUM7 802 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 TTC30BQ8N4P2 665 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 OR6Q1Q8NGQ2 317 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 PDFQ9HBH1 243 aa14.92□□□□□ -0.02
CNOT9-208ENST00000542068 RFXANKO14593 260 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 KLK8O60259 260 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 NPPAP01160 153 aa14.91□□□□□ -0.02
CNOT9-208ENST00000542068 IDH2P48735 452 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms