RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SEC13P55735 322 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 WNT3AP56704 352 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 GNA12Q03113 381 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 TRAF3Q13114 568 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 SEMA3AQ14563 771 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 POLD3Q15054 466 aaPredicted RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 CYP2A13Q16696 494 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 ANKDD1AQ495B1 522 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 XKR7Q5GH72 579 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 MARC1Q5VT66 337 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 OTUD1Q5VV17 481 aaPredicted RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 SULT1C3Q6IMI6 304 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 ZNF544Q6NX49 715 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 ERAP2Q6P179 960 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 ZNF549Q6P9A3 640 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 MSANTD1Q6ZTZ1 278 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 USP43Q70EL4 1123 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 KDELC2Q7Z4H8 507 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 DCP2Q8IU60 420 aaKnown RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 PHYKPLQ8IUZ5 450 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 MMAAQ8IVH4 418 aaKnown RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 ARL10Q8N8L6 244 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 CHDHQ8NE62 594 aaPredicted RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 OR2T12Q8NG77 320 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 RPLP0P6Q8NHW5 317 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 SCAMP5Q8TAC9 235 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 GRIN3AQ8TCU5 1115 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 HPS1Q92902 700 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 FKBP10Q96AY3 582 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 IMP4Q96G21 291 aaKnown RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 MSANTD3Q96H12 275 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 NSMCE3Q96MG7 304 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 SNX18Q96RF0 628 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 TRIB3Q96RU7 358 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 ZNF382Q96SR6 550 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 SLX1AQ9BQ83 275 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 TPSD1Q9BZJ3 242 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 ULBP1Q9BZM6 244 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 GABARAPL1Q9H0R8 117 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 ALG9Q9H6U8 611 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 SMPD4Q9NXE4 827 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 DKK3Q9UBP4 350 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 ZNF229Q9UJW7 825 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 DOLKQ9UPQ8 538 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 SAMD4AQ9UPU9 718 aaKnown RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 BTRCQ9Y297 605 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 WBP11Q9Y2W2 641 aaKnown RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 WNT6Q9Y6F9 365 aa10.15□□□□□ -0.78
CHFR-219ENST00000541341 ZFC3H1O60293 1989 aaKnown RBP10.15□□□□□ -0.78
CHFR-219ENST00000541341 DOCK4Q8N1I0 1966 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 SYNJ2BP-COX16A0A087WUM0 186 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 ILVBLA1L0T0 632 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 ELOVL7A1L3X0 281 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 FAM149AA5PLN7 773 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 SLC28A1O00337 649 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 SLC1A7O00341 560 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 RGS10O43665 173 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 IDH3BO43837 385 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 MAFKO60675 156 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 LRP3O75074 770 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 VPS26AO75436 327 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 ERN1O75460 977 aaKnown RBP10.14□□□□□ -0.79
CHFR-219ENST00000541341 RSL1D1O76021 490 aaKnown RBP10.14□□□□□ -0.79
CHFR-219ENST00000541341 MYO1DO94832 1006 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 WDR47O94967 919 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 F11P03951 625 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 RPS17P08708 135 aaKnown RBP10.14□□□□□ -0.79
CHFR-219ENST00000541341 PFKLP17858 780 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 CNR2P34972 360 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 SOX6P35712 828 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 CCR10P46092 362 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 PIK3CGP48736 1102 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 CDH13P55290 713 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 SH3BP2P78314 561 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 PPP2R2BQ00005 443 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 PRKCDQ05655 676 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 PLCL1Q15111 1095 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 PPP1R3AQ16821 1122 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 TMEM196Q5HYL7 178 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 STPG1Q5TH74 334 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 CACHD1Q5VU97 1274 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 SYPL2Q5VXT5 272 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 AFMIDQ63HM1 303 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 PNCKQ6P2M8 343 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 ERICH5Q6P6B1 374 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 PTAR1Q7Z6K3 402 aaPredicted RBP10.14□□□□□ -0.79
CHFR-219ENST00000541341 MON1AQ86VX9 555 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 TSPYL5Q86VY4 417 aaPredicted RBP10.14□□□□□ -0.79
CHFR-219ENST00000541341 OFCC1Q8IZS5 231 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 UMODL1-AS1Q8N2C9 162 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 STK40Q8N2I9 435 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 KIAA1958Q8N8K9 716 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 RTL3Q8N8U3 475 aaKnown RBP10.14□□□□□ -0.79
CHFR-219ENST00000541341 ACVR1CQ8NER5 493 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 OR6P1Q8NGX9 317 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 DNAJB14Q8TBM8 379 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 ATL1Q8WXF7 558 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 GLMNQ92990 594 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 MYDGFQ969H8 173 aa10.14□□□□□ -0.79
CHFR-219ENST00000541341 ISG20Q96AZ6 181 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms