RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 OSBPL9Q96SU4 736 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 ZFYVE21Q9BQ24 234 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 KLHL25Q9H0H3 589 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 ATP13A2Q9NQ11 1180 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 SEMA3GQ9NS98 782 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 C20orf96Q9NUD7 363 aaPredicted RBP9.98□□□□□ -0.81
CDCA3-208ENST00000540683 SPHK1Q9NYA1 384 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 TAS2R13Q9NYV9 303 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 ASIC3Q9UHC3 531 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 CORO1CQ9ULV4 474 aaPredicted RBP9.98□□□□□ -0.81
CDCA3-208ENST00000540683 VPS4AQ9UN37 437 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 CRYL1Q9Y2S2 319 aa9.98□□□□□ -0.81
CDCA3-208ENST00000540683 PTRH2Q9Y3E5 179 aaKnown RBP9.98□□□□□ -0.81
CDCA3-208ENST00000540683 ASH1LQ9NR48 2969 aaKnown RBP9.98□□□□□ -0.81
CDCA3-208ENST00000540683 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 TTLL8A6PVC2 850 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 MYO1CO00159 1063 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 PSIP1O75475 530 aaKnown RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 CEACAM4O75871 244 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 C8GP07360 202 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 HIST1H2AGP0C0S8 130 aaPredicted RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 HIST1H2ADP20671 130 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 OTX2P32243 289 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 GRK3P35626 688 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 PTGIRP43119 386 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 RPS18P62269 152 aaKnown RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 AIMP2Q13155 320 aaKnown RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 IL10RAQ13651 578 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 NDUFA9Q16795 377 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 SPANXN3Q5MJ09 141 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 GARNL3Q5VVW2 1013 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 NIPAL1Q6NVV3 410 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 NAPRTQ6XQN6 538 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 OVCH1Q7RTY7 1134 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 PRUNE1Q86TP1 453 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 LDB1Q86U70 411 aaPredicted RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 TRIM73Q86UV7 250 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 CAND1Q86VP6 1230 aaKnown RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 TBC1D19Q8N5T2 526 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 LINC01555Q8NAE3 123 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 BBOF1Q8ND07 529 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 OR2L3Q8NG85 312 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 FLVCR1-AS1Q8TAF5 88 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 SLCO2A1Q92959 643 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 HIST1H2AHQ96KK5 128 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 HIST1H2AJQ99878 128 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 H2AFJQ9BTM1 129 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 MENTQ9BUN1 341 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 TRIM54Q9BYV2 358 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 EPN3Q9H201 632 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 SLC26A1Q9H2B4 701 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 FAM60AQ9NP50 221 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 MRPS30Q9NP92 439 aaKnown RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 SLAMF7Q9NQ25 335 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 CUTCQ9NTM9 273 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 TRMT6Q9UJA5 497 aaKnown RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 PLAGL1Q9UM63 463 aa9.97□□□□□ -0.81
CDCA3-208ENST00000540683 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
CDCA3-208ENST00000540683 FITM1A5D6W6 292 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 CCDC188H7C350 402 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 AGPSO00116 658 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 CYC1P08574 325 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 ANXA5P08758 320 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 FURINP09958 794 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 MYBL2P10244 700 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 FDXRP22570 491 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 MMP11P24347 488 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 GRIA3P42263 894 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 GABRA4P48169 554 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 PNLIPRP1P54315 467 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 SOX8P57073 446 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 SP140Q13342 867 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 GBX1Q14549 363 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 MORF4L2Q15014 288 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 KLHL38Q2WGJ6 581 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 DEFB110Q30KQ9 67 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 CTSL3PQ5NE16 218 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 THEMIS2Q5TEJ8 643 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 ZNF385CQ66K41 422 aaPredicted RBP9.96□□□□□ -0.82
CDCA3-208ENST00000540683 MRPL14Q6P1L8 145 aaKnown RBP9.96□□□□□ -0.82
CDCA3-208ENST00000540683 TTLL10Q6ZVT0 673 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 GALNT7Q86SF2 657 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 MRGPREQ86SM8 312 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 KCNMB4Q86W47 210 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 VRK3Q8IV63 474 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 PNPLA2Q96AD5 504 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 SMAD5Q99717 465 aaKnown RBP9.96□□□□□ -0.82
CDCA3-208ENST00000540683 SPRTNQ9H040 489 aaPredicted RBP9.96□□□□□ -0.82
CDCA3-208ENST00000540683 AKIRIN1Q9H9L7 192 aaPredicted RBP9.96□□□□□ -0.82
CDCA3-208ENST00000540683 MLXIPLQ9NP71 852 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 C14orf105Q9NVL8 296 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 NSMCE4AQ9NXX6 385 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 ZNF282Q9UDV7 671 aaPredicted RBP9.96□□□□□ -0.82
CDCA3-208ENST00000540683 PCYOX1Q9UHG3 505 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 FBXO5Q9UKT4 447 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 DHRS7Q9Y394 339 aa9.96□□□□□ -0.82
CDCA3-208ENST00000540683 HYKKA2RU49 373 aa9.95□□□□□ -0.82
CDCA3-208ENST00000540683 H3BMH7 237 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms