RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 FUCA1P04066 466 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 ACP5P13686 325 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 HTR1BP28222 390 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 HSD17B2P37059 387 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 HTR6P50406 440 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 ERVK-8P63133 956 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 FASTKQ14296 549 aaKnown RBP16.37■□□□□ 0.21
COPS3-212ENST00000539941 GRB7Q14451 532 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 RNF220Q5VTB9 566 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 KIAA0895LQ68EN5 471 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 CAPN13Q6MZZ7 669 aaPredicted RBP16.37■□□□□ 0.21
COPS3-212ENST00000539941 Q6ZSR9 355 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 CHST15Q7LFX5 561 aaPredicted RBP16.37■□□□□ 0.21
COPS3-212ENST00000539941 LONP2Q86WA8 852 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 SNX32Q86XE0 403 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 OR2T11Q8NH01 316 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 OR5K2Q8NHB8 316 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 GATA6Q92908 595 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 PPP3R2Q96LZ3 170 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 WDR92Q96MX6 357 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 MYOCQ99972 504 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 SDR39U1Q9NRG7 319 aaPredicted RBP16.37■□□□□ 0.21
COPS3-212ENST00000539941 INTS7Q9NVH2 962 aaKnown RBP16.37■□□□□ 0.21
COPS3-212ENST00000539941 NMRK1Q9NWW6 199 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 KLQ9UEF7 1012 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 DMTF1Q9Y222 760 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 LOC100653049A0A140TA62 436 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 PRSS38A1L453 326 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 SERTM1A2A2V5 107 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 KRT87PA6NCN2 255 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 FAM170BA6NMN3 283 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 TNFRSF10CO14798 259 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 KRT34O76011 436 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 JUPP14923 745 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 CPOXP36551 454 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 LSAMPQ13449 338 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 ARHGAP19Q14CB8 494 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 ABRAXAS2Q15018 415 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 C6orf136Q5SQH8 315 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 SYTL1Q8IYJ3 562 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 MIER2Q8N344 545 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 MCUR1Q96AQ8 359 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 MED8Q96G25 268 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 BMFQ96LC9 184 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 OR2M4Q96R27 311 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 SGPP1Q9BX95 441 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 TRIT1Q9H3H1 467 aaKnown RBP16.37■□□□□ 0.21
COPS3-212ENST00000539941 CYP8B1Q9UNU6 501 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 KCNE2Q9Y6J6 123 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 ZNF839A8K0R7 811 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 PRAMEF26H0Y7S4 382 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 MAP3K7O43318 606 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 IDSP22304 550 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 GPX3P22352 226 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 CD6P30203 668 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 HNF4AP41235 474 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 CASP2P42575 452 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 PNLIPRP1P54315 467 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 CLDN2P57739 230 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 ZXDAP98168 799 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 IRF8Q02556 426 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 EMX2Q04743 252 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 CHIT1Q13231 466 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 E2F2Q14209 437 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 GAS6Q14393 721 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 KIF19Q2TAC6 998 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 SCIMPQ6UWF3 145 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 GCNT7Q6ZNI0 430 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 MYLK4Q86YV6 388 aaPredicted RBP16.36■□□□□ 0.21
COPS3-212ENST00000539941 UBALD2Q8IYN6 164 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 TBC1D21Q8IYX1 336 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 SFRP1Q8N474 314 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 TMEM145Q8NBT3 493 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 TOE1Q96GM8 510 aaKnown RBP16.36■□□□□ 0.21
COPS3-212ENST00000539941 BRINP2Q9C0B6 783 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 FGF22Q9HCT0 170 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 AIG1Q9NVV5 245 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 NDE1Q9NXR1 346 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 WSB2Q9NYS7 404 aaPredicted RBP16.36■□□□□ 0.21
COPS3-212ENST00000539941 SPATA7Q9P0W8 599 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 ITGB1BP2Q9UKP3 347 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 ZNF490Q9ULM2 529 aaPredicted RBP16.36■□□□□ 0.21
COPS3-212ENST00000539941 CCL27Q9Y4X3 112 aa16.36■□□□□ 0.21
COPS3-212ENST00000539941 FFAR3O14843 346 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 LSM1O15116 133 aaKnown RBP16.35■□□□□ 0.21
COPS3-212ENST00000539941 GPR42O15529 346 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 PI15O43692 258 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 ERGP11308 486 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 PCSK2P16519 638 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 HALP42357 657 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 GNPDA1P46926 289 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 CLCNKAP51800 687 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 TBPL1P62380 186 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 CTBSQ01459 385 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 SLC34A1Q06495 639 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 STX5Q13190 355 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 MAD2L1Q13257 205 aaPredicted RBP16.35■□□□□ 0.21
COPS3-212ENST00000539941 RPS6KA2Q15349 733 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 NR6A1Q15406 480 aa16.35■□□□□ 0.21
COPS3-212ENST00000539941 CPSF6Q16630 551 aaKnown RBP eCLIP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms