RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 BABAM1Q9NWV8 329 aa3.72□□□□□ -1.81
AC055720.1-201ENST00000539552 MTMR4Q9NYA4 1195 aa3.72□□□□□ -1.81
AC055720.1-201ENST00000539552 UBAP1Q9NZ09 502 aa3.72□□□□□ -1.81
AC055720.1-201ENST00000539552 THEGQ9P2T0 379 aa3.72□□□□□ -1.81
AC055720.1-201ENST00000539552 NUDCQ9Y266 331 aa3.72□□□□□ -1.81
AC055720.1-201ENST00000539552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.72□□□□□ -1.81
AC055720.1-201ENST00000539552 MRPS2Q9Y399 296 aaKnown RBP3.72□□□□□ -1.81
AC055720.1-201ENST00000539552 CACNA1SQ13698 1873 aa3.72□□□□□ -1.81
AC055720.1-201ENST00000539552 COL4A4P53420 1690 aaPredicted RBP3.71□□□□□ -1.81
AC055720.1-201ENST00000539552 KIF16BQ96L93 1317 aa3.71□□□□□ -1.81
AC055720.1-201ENST00000539552 CENPJQ9HC77 1338 aaPredicted RBP3.71□□□□□ -1.81
AC055720.1-201ENST00000539552 NCAPD2Q15021 1401 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 NSD3Q9BZ95 1437 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 LRRC37A2A6NM11 1700 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TRGV11A0A075B6L2 103 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TARSL2A2RTX5 802 aaKnown RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 C17orf100A8MU93 164 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 GRXCR1A8MXD5 290 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 IFNL4K9M1U5 179 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TLR4O00206 839 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PRRG1O14668 218 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 HS3ST1O14792 307 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TEX28O15482 410 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 STRNO43815 780 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TMPRSS11DO60235 418 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 RANBP6O60518 1105 aaKnown RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TBX19O60806 448 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 NME6O75414 186 aaPredicted RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 ECI2O75521 394 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TOM1L1O75674 476 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 MFN2O95140 757 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 POP4O95707 220 aaKnown RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 OTCP00480 354 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TPM3P06753 285 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PGK2P07205 417 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 IVLP07476 585 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 YES1P07947 543 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 MMP10P09238 476 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 SBK2P0C263 348 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PCNAP12004 261 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PFKFB1P16118 471 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 CREB1P16220 341 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 IGFBP2P18065 325 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 CD72P21854 359 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 DRD4P21917 467 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 MATN1P21941 496 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 EEF1B2P24534 225 aaKnown RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 CHMLP26374 656 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 GSTM2P28161 218 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 CXCR5P32302 372 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 IGHMBP2P38935 993 aaKnown RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 CDKN1AP38936 164 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 HTR6P50406 440 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 MTTPP55157 894 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PTENP60484 403 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 SRP54P61011 504 aaKnown RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 NHLH2Q02577 135 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 HSPA14Q0VDF9 509 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 LARS2Q15031 903 aaKnown RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 MAPK11Q15759 364 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 CNGA3Q16281 694 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 IQCCQ4KMZ1 466 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PAPD7Q5XG87 772 aaKnown RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TXNRD3NBQ6F5E7 133 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 WBP2NLQ6ICG8 309 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 SULT1C3Q6IMI6 304 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PACS1Q6VY07 963 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 RD3Q7Z3Z2 195 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TMCO2Q7Z6W1 182 aaPredicted RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 RTN4RL2Q86UN3 420 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 CUZD1Q86UP6 607 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 RASAL3Q86YV0 1011 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 GHDCQ8N2G8 530 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 SETD9Q8NE22 299 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 MDGA1Q8NFP4 955 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 OR52N2Q8NGI0 321 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 OR56B1Q8NGI3 324 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 OR10T2Q8NGX3 314 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 OR52J3Q8NH60 311 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM110DQ8TAY7 271 aaPredicted RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PROKR1Q8TCW9 393 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC20A1Q8WUM9 679 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 DNAJA4Q8WW22 397 aaPredicted RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 XAGE5Q8WWM1 108 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 SELENOMQ8WWX9 145 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 TMEM125Q96AQ2 219 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 LRRC39Q96DD0 335 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PGM2Q96G03 612 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 BSCL2Q96G97 398 aaPredicted RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 ARL5BQ96KC2 179 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 IFT74Q96LB3 600 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PANX3Q96QZ0 392 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 ASCL2Q99929 193 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 CAPS2Q9BXY5 557 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 ACTRT3Q9BYD9 372 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 DDX47Q9H0S4 455 aaKnown RBP3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 ATG10Q9H0Y0 220 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 UBQLN3Q9H347 655 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 PLEKHA4Q9H4M7 779 aa3.71□□□□□ -1.82
AC055720.1-201ENST00000539552 C8orf33Q9H7E9 229 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms