RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 COX14Q96I36 57 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 HIST1H2AHQ96KK5 128 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 HIST1H2AJQ99878 128 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 H2AFJQ9BTM1 129 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 AKTIPQ9H8T0 292 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 OPTCQ9UBM4 332 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 PAIP2BQ9ULR5 123 aaKnown RBP16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 PRKAB1Q9Y478 270 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 SOCS2O14508 198 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 BMP10O95393 424 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 MATN4O95460 622 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 ENO2P09104 434 aaPredicted RBP16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 UROSP10746 265 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 BMP2P12643 396 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 SLC7A2P52569 658 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 CDH15P55291 814 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 PRKCQQ04759 706 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 IRAK1BP1Q5VVH5 260 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 DOK6Q6PKX4 331 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 CRTC3Q6UUV7 619 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 ADAMTSL4Q6UY14 1074 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 HACD2Q6Y1H2 254 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 FAM47BQ8NA70 645 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 SMYD1Q8NB12 490 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 OR4F6Q8NGB9 312 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 OR9I1Q8NGQ6 314 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 RPLP0P6Q8NHW5 317 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 UBTD2Q8WUN7 234 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 TRIM54Q9BYV2 358 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 TBCCD1Q9NVR7 557 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 STK16O75716 305 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 CD97P48960 835 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 CDK3Q00526 305 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 INPP5AQ14642 412 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 OR2T34Q8NGX1 318 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 TFAP2CQ92754 450 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 GLMNQ92990 594 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 SLC39A3Q9BRY0 314 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 ARMC1Q9NVT9 282 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 GMPR2Q9P2T1 348 aaKnown RBP16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 ANGPTL3Q9Y5C1 460 aa16.6■□□□□ 0.25
PCDHB17P-201ENST00000539533 K7EPI3 171 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 SLC16A5O15375 505 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 AKAP10O43572 662 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 PLRG1O43660 514 aaKnown RBP16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 STAMBPO95630 424 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 CAPN1P07384 714 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 CYP2A7P20853 494 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 GRIA3P42263 894 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 RGS19P49795 217 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 MRPS21P82921 87 aaKnown RBP16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 TRAF3Q13114 568 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 SP140Q13342 867 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 GTF2H3Q13889 308 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 GRB7Q14451 532 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 PLA2G4EQ3MJ16 856 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 XKR5Q6UX68 686 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 TMEM92Q6UXU6 159 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 ERMP1Q7Z2K6 904 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 RASGRP3Q8IV61 690 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 MCOLN3Q8TDD5 553 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 CANT1Q8WVQ1 401 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 PYCR2Q96C36 320 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 SIPA1Q96FS4 1042 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 CD93Q9NPY3 652 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 OR1A2Q9Y585 309 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 A0A1W2PQU0 124 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 ARHGEF33A8MVX0 844 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 VEGFDO43915 354 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 POP7O75817 140 aaKnown RBP16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 GSTM1P09488 218 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 ATP6V1B2P21281 511 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 ADPRHP54922 357 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 GSTM4Q03013 218 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 IRF4Q15306 451 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 CCSMST1Q4G0I0 132 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 TRMT11Q7Z4G4 463 aaKnown RBP16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 FAM124AQ86V42 546 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 SLC22A15Q8IZD6 547 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 FAM110BQ8TC76 370 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 METTL6Q8TCB7 284 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 FAM131CQ96AQ9 280 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 POLG2Q9UHN1 485 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 ST14Q9Y5Y6 855 aa16.59■□□□□ 0.25
PCDHB17P-201ENST00000539533 PSIP1O75475 530 aaKnown RBP16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 OTCP00480 354 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 ALDOCP09972 364 aaKnown RBP16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 MAT2AP31153 395 aaKnown RBP16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 GGT5P36269 586 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 STT3AP46977 705 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 RPS21P63220 83 aaKnown RBP16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 AGERQ15109 404 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 MAP7D1Q3KQU3 841 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 KCTD21Q4G0X4 260 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 CDKL4Q5MAI5 379 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 DHRS4L2Q6PKH6 230 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 MILR1Q7Z6M3 343 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 C11orf96Q7Z7L8 435 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 PATL1Q86TB9 770 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms