RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.88□□□□□ -1.79
CCDC7-209ENST00000539197 TSPAN16Q9UKR8 245 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 TRIM17Q9Y577 477 aa3.88□□□□□ -1.79
CCDC7-209ENST00000539197 ARID4BQ4LE39 1312 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-209ENST00000539197 GALR3O60755 368 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-209ENST00000539197 ARL3P36405 182 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 SLC9A3P48764 834 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 SIRPAP78324 504 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 CXCL9Q07325 125 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 EXT1Q16394 746 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 HAUS3Q68CZ6 603 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 TEX38Q6PEX7 206 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 Q6ZVH6 145 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 KLHDC1Q8N7A1 406 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 SCFD2Q8WU76 684 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 Q9N2K0 584 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 B4GALT7Q9UBV7 327 aa3.87□□□□□ -1.79
CCDC7-209ENST00000539197 ANKUB1A6NFN9 424 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 SNURFLB1AK76 121 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 TSPAN1O60635 241 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 CEACAM4O75871 244 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 PRKAR1AP10644 381 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 TM4SF1P30408 202 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 ARSEP51690 589 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 POU5F1Q01860 360 aaKnown RBP3.86□□□□□ -1.79
CCDC7-209ENST00000539197 KRT32Q14532 448 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 HSP90AB4PQ58FF6 505 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 LCLAT1Q6UWP7 414 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 ZER1Q7Z7L7 766 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 UCMAQ8WVF2 138 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 DHX58Q96C10 678 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 MAP3K3Q99759 626 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 CCDC3Q9BQI4 270 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 OVOL2Q9BRP0 275 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 SPATC1LQ9H0A9 340 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 GKN1Q9NS71 199 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 AASSQ9UDR5 926 aa3.86□□□□□ -1.79
CCDC7-209ENST00000539197 COL4A4P53420 1690 aaPredicted RBP3.85□□□□□ -1.79
CCDC7-209ENST00000539197 IGHV4-30-2A0A087WSY4 118 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 G3V2L1 256 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 ZBTB25P24278 435 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 CHMP24386 653 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 ACSL1P33121 698 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 SOX3P41225 446 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 CDH18Q13634 790 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 IRF3Q14653 427 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 FAM189A2Q15884 450 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 C3AR1Q16581 482 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 CA9Q16790 459 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 FHL5Q5TD97 284 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 TMPRSS11BQ86T26 416 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 CCDC34Q96HJ3 373 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 ZNF597Q96LX8 424 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 FAM20AQ96MK3 541 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 LINC00167Q96N53 147 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 LPAR4Q99677 370 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 NYXQ9GZU5 481 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 PARLQ9H300 379 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 TRPV4Q9HBA0 871 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 GTSE1Q9NYZ3 720 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 POMT2Q9UKY4 750 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 PA2G4Q9UQ80 394 aaKnown RBP3.85□□□□□ -1.79
CCDC7-209ENST00000539197 ZNF541Q9H0D2 1346 aa3.85□□□□□ -1.79
CCDC7-209ENST00000539197 TDRD9Q8NDG6 1382 aaKnown RBP3.85□□□□□ -1.79
CCDC7-209ENST00000539197 COL16A1Q07092 1604 aaPredicted RBP3.84□□□□□ -1.79
CCDC7-209ENST00000539197 SNAP91O60641 907 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 OR2T7P0C7T2 308 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 RPL35AP18077 110 aaKnown RBP3.84□□□□□ -1.79
CCDC7-209ENST00000539197 HADHAP40939 763 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 MFAP4P55083 255 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 IRX4P78413 519 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 MAMLD1Q13495 774 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 CAPRIN1Q14444 709 aaKnown RBP3.84□□□□□ -1.79
CCDC7-209ENST00000539197 TAB1Q15750 504 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 MS4A18Q3C1V0 323 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 LEKR1Q6ZMV7 388 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 PHC2Q8IXK0 858 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 C9orf43Q8TAL5 461 aaPredicted RBP3.84□□□□□ -1.79
CCDC7-209ENST00000539197 CALML4Q96GE6 196 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 SEPT11Q9NVA2 429 aaKnown RBP3.84□□□□□ -1.79
CCDC7-209ENST00000539197 PGAP2Q9UHJ9 254 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 ZNF148Q9UQR1 794 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 VSIG4Q9Y279 399 aa3.84□□□□□ -1.79
CCDC7-209ENST00000539197 ZNF644Q9H582 1327 aaPredicted RBP3.84□□□□□ -1.79
CCDC7-209ENST00000539197 ZNF840PA6NDX5 716 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 TMEM221A6NGB7 291 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 B4E171 279 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 PAPSS1O43252 624 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-209ENST00000539197 KLK2P20151 261 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 TSPAN7P41732 249 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 LMAN1P49257 510 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 HLCSP50747 726 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 NDPQ00604 133 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 SYT14P1Q58G82 188 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 BAIAP2L2Q6UXY1 529 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 CEP57Q86XR8 500 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 OR5T2Q8NGG2 359 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 PIGBQ92521 554 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 MTMR12Q9C0I1 747 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms