RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PTGIRP43119 386 aa16.44■□□□□ 0.22
SCARB1-205ENST00000538291 BTN3A2P78410 334 aa16.44■□□□□ 0.22
SCARB1-205ENST00000538291 TEAD2Q15562 447 aa16.44■□□□□ 0.22
SCARB1-205ENST00000538291 RALGPS1Q5JS13 557 aa16.44■□□□□ 0.22
SCARB1-205ENST00000538291 NAPRTQ6XQN6 538 aa16.44■□□□□ 0.22
SCARB1-205ENST00000538291 ANKFN1Q8N957 763 aa16.44■□□□□ 0.22
SCARB1-205ENST00000538291 MYCLP1P12525 358 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 ANXA8P13928 327 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 ARCN1P48444 511 aaKnown RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 KCNQ1P51787 676 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 DSTNP60981 165 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 GPR17Q13304 367 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 GPR68Q15743 365 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 LMX1AQ8TE12 382 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 LRTOMTQ8WZ04 291 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 COL21A1Q96P44 957 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 B3GAT2Q9NPZ5 323 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 GDAP2Q9NXN4 497 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 DNAJB9Q9UBS3 223 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 FETUBQ9UGM5 382 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 INSL5Q9Y5Q6 135 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 C3P01024 1663 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 MMP20O60882 483 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 CLEC3AO75596 197 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 FGF18O76093 207 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 SLC11A1P49279 550 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 ALG1LQ6GMV1 187 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 PDE12Q6L8Q7 609 aaKnown RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 CTU1Q7Z7A3 348 aaKnown RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 SMOC2Q9H3U7 446 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 C19orf25Q9UFG5 118 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 TLL2Q9Y6L7 1015 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 FZD9O00144 591 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 NFKBIEO00221 500 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 SCDO00767 359 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 TYRP14679 529 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 CCNHP51946 323 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 DNM1P34Q6PK57 102 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 KCTD8Q6ZWB6 473 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 SATL1Q86VE3 508 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 BANPQ8N9N5 519 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 TFGQ92734 400 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 PMM1Q92871 262 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 A8MU76 341 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 CBFA2T3O75081 653 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 TXNL4AP83876 142 aaKnown RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 FRG2Q64ET8 278 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 CHERPQ8IWX8 916 aaKnown RBP16.43■□□□□ 0.22
SCARB1-205ENST00000538291 FRG2BQ96QU4 278 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 KXD1Q9BQD3 176 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 SLC35A5Q9BS91 424 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 YIPF4Q9BSR8 244 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 Q9N2J8 555 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 KLRF1Q9NZS2 232 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 TBC1D24Q9ULP9 559 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 PDE10AQ9Y233 779 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 HS3ST4Q9Y661 456 aa16.43■□□□□ 0.22
SCARB1-205ENST00000538291 H3BNX3 289 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 TACSTD2P09758 323 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 NCBP2-AS2Q69YL0 99 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 TPRG1Q6ZUI0 275 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 ADGRD2Q7Z7M1 963 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 RAB43Q86YS6 212 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 NXPE1Q8N323 547 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 OR5K1Q8NHB7 308 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 ZNF461Q8TAF7 563 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 SGCDQ92629 289 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 PHF12Q96QT6 1004 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 RPL36Q9Y3U8 105 aaKnown RBP16.42■□□□□ 0.22
SCARB1-205ENST00000538291 SQORQ9Y6N5 450 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 A0A1W2PQ45 241 aaPredicted RBP16.42■□□□□ 0.22
SCARB1-205ENST00000538291 A0A1W2PQY0 241 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 SAGE2PA6NJ88 616 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 KCNE1P15382 129 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 NRLP54845 237 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 SCN1BQ07699 218 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 CRTC2Q53ET0 693 aaPredicted RBP16.42■□□□□ 0.22
SCARB1-205ENST00000538291 BCO2Q9BYV7 579 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 ECI2O75521 394 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 ACVRL1P37023 503 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 CRB2Q5IJ48 1285 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 NPLOC4Q8TAT6 608 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 PCDHGB1Q9Y5G3 927 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 LINGO3P0C6S8 592 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 GALK1P51570 392 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 MLLT6P55198 1093 aaPredicted RBP16.42■□□□□ 0.22
SCARB1-205ENST00000538291 BNIP1Q12981 228 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 AKAP14Q86UN6 197 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 GRHL3Q8TE85 626 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 TMEM209Q96SK2 561 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 LRRC3Q9BY71 257 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 ADGRB2O60241 1585 aa16.42■□□□□ 0.22
SCARB1-205ENST00000538291 OR1I1O60431 355 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 HAPLN1P10915 354 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 SLC6A9P48067 706 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 GBX2P52951 348 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-205ENST00000538291 MXD1Q05195 221 aa16.41■□□□□ 0.22
SCARB1-205ENST00000538291 ZMYND11Q15326 602 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms