RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 EIPR1Q53HC9 387 aa10.95□□□□□ -0.66
LINC00346-201ENST00000538077 ZNF527Q8NB42 609 aa10.95□□□□□ -0.66
LINC00346-201ENST00000538077 DOK4Q8TEW6 326 aa10.95□□□□□ -0.66
LINC00346-201ENST00000538077 ING4Q9UNL4 249 aa10.95□□□□□ -0.66
LINC00346-201ENST00000538077 CDC40O60508 579 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC00346-201ENST00000538077 ATP5A1P25705 553 aaKnown RBP10.95□□□□□ -0.66
LINC00346-201ENST00000538077 JAG1P78504 1218 aa10.95□□□□□ -0.66
LINC00346-201ENST00000538077 ZDHHC21Q8IVQ6 265 aa10.95□□□□□ -0.66
LINC00346-201ENST00000538077 TWNKQ96RR1 684 aa10.95□□□□□ -0.66
LINC00346-201ENST00000538077 RAB11FIP5Q9BXF6 653 aa10.95□□□□□ -0.66
LINC00346-201ENST00000538077 MKKSQ9NPJ1 570 aaPredicted RBP10.95□□□□□ -0.66
LINC00346-201ENST00000538077 HCN2Q9UL51 889 aa10.95□□□□□ -0.66
LINC00346-201ENST00000538077 FAM172BPA6NC97 362 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 PEX12O00623 359 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 THRBP10828 461 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 CSF2RAP15509 400 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 AZGP1P25311 298 aaKnown RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 CD47Q08722 323 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 DPYSQ14117 519 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 LCN1P1Q5VSP4 162 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 ZNF613Q6PF04 617 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 GATSQ8NAP1 163 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 OR10Q1Q8NGQ4 319 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 DIRAS2Q96HU8 199 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 TRMOQ9BU70 441 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 GPR88Q9GZN0 384 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 XKR8Q9H6D3 395 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 FTSJ1Q9UET6 329 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 K7EPI3 171 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 FZD9O00144 591 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 PI15O43692 258 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 POP7O75817 140 aaKnown RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 TRAP1Q12931 704 aaKnown RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 HNRNPDQ14103 355 aaKnown RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 USP30Q70CQ3 517 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 NFKBIDQ8NI38 313 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 ZSCAN5AQ9BUG6 496 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 FZD4Q9ULV1 537 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 ASB3Q9Y575 518 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 KLK3P07288 261 aaPredicted RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 FAUP35544 74 aaKnown RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 HSF2Q03933 536 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 LENG8Q96PV6 779 aaPredicted RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 PCDHGA11Q9Y5H2 935 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 IGKV6D-41A0A0C4DH26 115 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 NPIPA5E9PKD4 350 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 MAP2K7O14733 419 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 ITM2AO43736 263 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 SDC2P34741 201 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 CLCN4P51793 760 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 MLLT10P55197 1068 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 DLG1Q12959 904 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 C1orf61Q13536 156 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 IFI44LQ53G44 452 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 TMEM214Q6NUQ4 689 aaKnown RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 GPR153Q6NV75 609 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 MBOAT1Q6ZNC8 495 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 WDR60Q8WVS4 1066 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 HPS1Q92902 700 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 GFM1Q96RP9 751 aaKnown RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 CHIAQ9BZP6 476 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 RC3H2Q9HBD1 1191 aaKnown RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 SERINC1Q9NRX5 453 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 CALML5Q9NZT1 146 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 NPIPA1Q9UND3 350 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 SNX7Q9UNH6 387 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 WBP11Q9Y2W2 641 aaKnown RBP10.94□□□□□ -0.66
LINC00346-201ENST00000538077 UPK3BL1B0FP48 263 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 TMEM233B4DJY2 109 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 UPK3BL2E5RIL1 263 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 E7ENX8 843 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 TSPAN5P62079 268 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 LY6G5CQ5SRR4 150 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 OR4F3Q6IEY1 312 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 OGFOD2Q6N063 350 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 MCFD2Q8NI22 146 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 PARPBPQ9NWS1 579 aa10.94□□□□□ -0.66
LINC00346-201ENST00000538077 PLK4O00444 970 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 MSX1P28360 303 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 TAS2R39P59534 338 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 RFTN1Q14699 578 aaPredicted RBP10.93□□□□□ -0.66
LINC00346-201ENST00000538077 MS4A13Q5J8X5 152 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 CARD17Q5XLA6 110 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 TXNRD3NBQ6F5E7 133 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 HMGN2P46Q86SG4 172 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 TMEM130Q8N3G9 435 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 C1orf52Q8N6N3 182 aaKnown RBP10.93□□□□□ -0.66
LINC00346-201ENST00000538077 SGCDQ92629 289 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 SH3YL1Q96HL8 342 aaPredicted RBP10.93□□□□□ -0.66
LINC00346-201ENST00000538077 CCDC28BQ9BUN5 200 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 ZNF860A6NHJ4 632 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 CH25HO95992 272 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 RB1P06400 928 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 ENGP17813 658 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 HCAR3P49019 387 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 GMFBP60983 142 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 ZNF311Q5JNZ3 666 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 CRTC1Q6UUV9 634 aa10.93□□□□□ -0.66
LINC00346-201ENST00000538077 CMTR2Q8IYT2 770 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms