RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 OTCP00480 354 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 C4BPAP04003 597 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PCSK1P29120 753 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 SLC1A2P43004 574 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ABRQ12979 859 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 LCP2Q13094 533 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 UGT8Q16880 541 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TSPYL5Q86VY4 417 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 VWA5B2Q8N398 1253 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GLB1L3Q8NCI6 653 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 OR4A15Q8NGL6 344 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PCDH19Q8TAB3 1148 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM203Q969S6 136 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CREB3L1Q96BA8 519 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 LINGO1Q96FE5 620 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 SLC35C2Q9NQQ7 365 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ARL15Q9NXU5 204 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF490Q9ULM2 529 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ANGPT4Q9Y264 503 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 OAS3Q9Y6K5 1087 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 EDIL3O43854 480 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 HBP1O60381 514 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 EEDO75530 441 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 OR5F1O95221 314 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TNNI3P19429 210 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 SLC6A2P23975 617 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GDI2P50395 445 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 FAPQ12884 760 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 BOP1Q14137 746 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 C8orf82Q6P1X6 216 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 AFTPHQ6ULP2 937 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 SLC16A12Q6ZSM3 486 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ASPGQ86U10 573 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 LIX1Q8N485 282 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 FAM151AQ8WW52 585 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 FCRL4Q96PJ5 515 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 MND1Q9BWT6 205 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 FOLH1BQ9HBA9 442 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GPN1Q9HCN4 374 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 SDR39U1Q9NRG7 319 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ABI2Q9NYB9 513 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 NOSIPQ9Y314 301 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 STON1Q9Y6Q2 735 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 COL18A1P39060 1754 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PSME4Q14997 1843 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 A8MT66 165 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 C19orf81C9J6K1 198 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 E9PAM4 449 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 RETP07949 1114 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 NOS3P29474 1203 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CBX5P45973 191 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 MAN2A2P49641 1150 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GZMKP49863 264 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF81P51508 661 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 RHOAP61586 193 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 OLIG2Q13516 323 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CPSF6Q16630 551 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PTPRNQ16849 979 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 HACD4Q5VWC8 232 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 STEAP3Q658P3 488 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PDE12Q6L8Q7 609 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 NOTUMQ6P988 496 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CPNE9Q8IYJ1 553 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF655Q8N720 491 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF614Q8N883 585 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PMEPA1Q969W9 287 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 NXF2Q9GZY0 626 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM134Q9H6X4 195 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 IFT22Q9H7X7 185 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GLTPQ9NZD2 209 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 DYRK1BQ9Y463 629 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 F5H5T6 163 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 KPNA5O15131 536 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 B4GALT5O43286 388 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 GRID2O43424 1007 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PDGFAP04085 211 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 FGF4P08620 206 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ACADMP11310 421 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 RENBPP51606 427 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 DGKEP52429 567 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PSMD4P55036 377 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CAPSQ13938 189 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CLCA4Q14CN2 919 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 DPYSL2Q16555 572 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 LIN54Q6MZP7 749 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 LAPTM4BQ86VI4 370 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 RNF130Q86XS8 419 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 HID1Q8IV36 788 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 CMTR2Q8IYT2 770 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 PLD6Q8N2A8 252 aaKnown RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 IL17RDQ8NFM7 739 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 GPR156Q8NFN8 814 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 OR7G3Q8NG95 312 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SPPL2BQ8TCT7 592 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 ING5Q8WYH8 240 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 SLCO4A1Q96BD0 722 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 C17orf62Q9BQA9 187 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 WACQ9BTA9 647 aa5.27□□□□□ -1.57
PTPRD-213ENST00000537002 FAM126AQ9BYI3 521 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-213ENST00000537002 C20orf27Q9GZN8 174 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms