RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 IL1RAPL1Q9NZN1 696 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 NXT1Q9UKK6 140 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 GUCA1BQ9UMX6 200 aa18.85■□□□□ 0.61
TNFRSF1B-204ENST00000536782 FITM1A5D6W6 292 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ANKUB1A6NFN9 424 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 AP3B1O00203 1094 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SOCS6O14544 535 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 SRPX2O60687 465 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 C1orf105O95561 183 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ZSCAN5DPP0CG00 497 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 RPS3P23396 243 aaKnown RBP eCLIP18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CRADDP78560 199 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ELOAQ14241 798 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CCNG2Q16589 344 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CRB2Q5IJ48 1285 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 IRAK1BP1Q5VVH5 260 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 COX15Q7KZN9 410 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ZGRF1Q86YA3 2104 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 VPS50Q96JG6 964 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 FOPNLQ96NB1 174 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 WDR77Q9BQA1 342 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 BFARQ9NZS9 450 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 ERRFI1Q9UJM3 462 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 PCDHGA10Q9Y5H3 936 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 HS3ST3B1Q9Y662 390 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 NFS1Q9Y697 457 aa18.84■□□□□ 0.61
TNFRSF1B-204ENST00000536782 CTSVO60911 334 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ALOX12BO75342 701 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 NMBRP28336 390 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CCNFP41002 786 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 BDKRB1P46663 353 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 OR1D4P47884 311 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 NPY2RP49146 381 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 EIF3BP55884 814 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 VSX2P58304 361 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 BASP1P80723 227 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 RPS6KA1Q15418 735 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 WASHC2DQ5SRD0 308 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 AGAP7PQ5VUJ5 663 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 KIRREL2Q6UWL6 708 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 C4orf22Q6V702 233 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SHISA6Q6ZSJ9 500 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CUZD1Q86UP6 607 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 METTL27Q8N6F8 245 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 OTUD6BQ8N6M0 293 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SPC24Q8NBT2 197 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 HMGCLL1Q8TB92 370 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MAGEC3Q8TD91 643 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 AGAP4Q96P64 663 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MIPEPQ99797 713 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SOX17Q9H6I2 414 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SEMA3GQ9NS98 782 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CTSFQ9UBX1 484 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 FAM169AQ9Y6X4 670 aa18.83■□□□□ 0.6
TNFRSF1B-204ENST00000536782 WIPF3A6NGB9 483 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 GOLGA6L6A8MZA4 724 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 PSMB5P28074 263 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 RBBP7Q16576 425 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 TUBB8Q3ZCM7 444 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CCSMST1Q4G0I0 132 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 DRICH1Q6PGQ1 229 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CNSTQ6PJW8 725 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 OR2L3Q8NG85 312 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 PPP4R1Q8TF05 950 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 BARD1Q99728 777 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 AGPAT4Q9NRZ5 378 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 RUVBL2Q9Y230 463 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SLC5A6Q9Y289 635 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 DRG1Q9Y295 367 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 KLK4Q9Y5K2 254 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MAU2Q9Y6X3 613 aa18.82■□□□□ 0.6
TNFRSF1B-204ENST00000536782 A0A0J9YVX5 310 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 HYKKA2RU49 373 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 VSTM2BA6NLU5 285 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 LDLRP01130 860 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SIX1Q15475 284 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 HIF1AQ16665 826 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CTSL3PQ5NE16 218 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MEI1Q5TIA1 1274 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 FRMPD2BQ6IN97 320 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MRNIPQ6NTE8 343 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 IGFL2Q6UWQ7 119 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 GSTA5Q7RTV2 222 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 MAMDC2Q7Z304 686 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SDCCAG8Q86SQ7 713 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 PARP9Q8IXQ6 854 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 OR2A1Q8NGT9 310 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 DNAJB14Q8TBM8 379 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 COG1Q8WTW3 980 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 C5orf34Q96MH7 638 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 LHPPQ9H008 270 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ZNF304Q9HCX3 659 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 SPATA7Q9P0W8 599 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 ZC3H7BQ9UGR2 993 aaKnown RBP18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 NTNG1Q9Y2I2 539 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 CSAG2Q9Y5P2 127 aa18.81■□□□□ 0.6
TNFRSF1B-204ENST00000536782 KRT87PA6NCN2 255 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 PFDN6O15212 129 aa18.8■□□□□ 0.6
TNFRSF1B-204ENST00000536782 VAPBO95292 243 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms