RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 MTRF1LQ9UGC7 380 aaKnown RBP17.33■□□□□ 0.36
CCDC61-201ENST00000536603 LNPEPQ9UIQ6 1025 aa17.33■□□□□ 0.36
CCDC61-201ENST00000536603 RARRES3Q9UL19 164 aa17.33■□□□□ 0.36
CCDC61-201ENST00000536603 BTRCQ9Y297 605 aa17.33■□□□□ 0.36
CCDC61-201ENST00000536603 A0A0J9YY10 115 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 FAM159BA6NKW6 160 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 EIF3FO00303 357 aaPredicted RBP17.32■□□□□ 0.36
CCDC61-201ENST00000536603 MAP3K7O43318 606 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 ZBTB14O43829 449 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 PRKAR1AP10644 381 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 MAP4P27816 1152 aaKnown RBP17.32■□□□□ 0.36
CCDC61-201ENST00000536603 UBAP2LQ14157 1087 aaKnown RBP17.32■□□□□ 0.36
CCDC61-201ENST00000536603 GPR19Q15760 415 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 SLC5A12Q1EHB4 618 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 CYB5D1Q6P9G0 228 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 PPP1R3BQ86XI6 285 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 FAM20CQ8IXL6 584 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 DENND1AQ8TEH3 1009 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 SLC22A18Q96BI1 424 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 PKP4Q99569 1192 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 SPRY4Q9C004 299 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 ZNF71Q9NQZ8 489 aaPredicted RBP17.32■□□□□ 0.36
CCDC61-201ENST00000536603 FGF21Q9NSA1 209 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 SPATA7Q9P0W8 599 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 ANKMY1Q9P2S6 941 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 TUBD1Q9UJT1 453 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 PILRAQ9UKJ1 303 aa17.32■□□□□ 0.36
CCDC61-201ENST00000536603 NAV2Q8IVL1 2488 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 FAM95CA0A1B0GW59 222 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 GFYI3L273 518 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 SPAG6O75602 509 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 STK17BO94768 372 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 SYF2O95926 243 aaKnown RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 ZNF28P17035 718 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 FASTKQ14296 549 aaKnown RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 SF1Q15637 639 aaKnown RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 IGFBP7Q16270 282 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 LRRC8EQ6NSJ5 796 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 UBE2R2Q712K3 238 aaPredicted RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 BPHLQ86WA6 291 aaPredicted RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 CTAGE3PQ8IX95 158 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 NLGN4XQ8N0W4 816 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 C19orf47Q8N9M1 422 aaKnown RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 NLGN4YQ8NFZ3 816 aaPredicted RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 C9orf43Q8TAL5 461 aaPredicted RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 FBF1Q8TES7 1133 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 AENQ8WTP8 325 aaKnown RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 LINGO1Q96FE5 620 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 MCMBPQ9BTE3 642 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 ULBP3Q9BZM4 244 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 RHOJQ9H4E5 214 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 NINJ2Q9NZG7 142 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.31■□□□□ 0.36
CCDC61-201ENST00000536603 TXNDC16Q9P2K2 825 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 ANAPC2Q9UJX6 822 aa17.31■□□□□ 0.36
CCDC61-201ENST00000536603 MYO1CO00159 1063 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 NKX2-8O15522 239 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 C1QAP02745 245 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 OAS2P29728 719 aaKnown RBP17.3■□□□□ 0.36
CCDC61-201ENST00000536603 CASRP41180 1078 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 IL2P60568 153 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 ZIC1Q15915 447 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 CYP2A13Q16696 494 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 KBTBD12Q3ZCT8 623 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC61-201ENST00000536603 CDHR3Q6ZTQ4 885 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 TIPARPQ7Z3E1 657 aaKnown RBP17.3■□□□□ 0.36
CCDC61-201ENST00000536603 RELL1Q8IUW5 271 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 MYO1HQ8N1T3 1032 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 FBXO15Q8NCQ5 510 aaPredicted RBP17.3■□□□□ 0.36
CCDC61-201ENST00000536603 HMGCLL1Q8TB92 370 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 DLG3Q92796 817 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 ZNF501Q96CX3 271 aaPredicted RBP17.3■□□□□ 0.36
CCDC61-201ENST00000536603 VPS39Q96JC1 886 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 SLC45A3Q96JT2 553 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 CPNE1Q99829 537 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 EFHD1Q9BUP0 239 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 FAM60AQ9NP50 221 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 ADAMTS6Q9UKP5 1117 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 KLHL20Q9Y2M5 609 aa17.3■□□□□ 0.36
CCDC61-201ENST00000536603 MTO1Q9Y2Z2 717 aaKnown RBP17.3■□□□□ 0.36
CCDC61-201ENST00000536603 TMEM184BQ9Y519 407 aaPredicted RBP17.3■□□□□ 0.36
CCDC61-201ENST00000536603 PRICKLE3O43900 615 aaPredicted RBP17.29■□□□□ 0.36
CCDC61-201ENST00000536603 KIAA0754O94854 1291 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 TIAF1O95411 115 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 TSPAN12O95859 305 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 DLGAP3O95886 979 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 NTRK1P04629 796 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 MAGP20916 626 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 STX2P32856 288 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 TAS2R39P59534 338 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 PWWP2BQ6NUJ5 590 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 TMEM207Q6UWW9 146 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 CEP128Q6ZU80 1094 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 PPM1NQ8N819 430 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 TCTN2Q96GX1 697 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 EPB41L4BQ9H329 900 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 CDC42EP4Q9H3Q1 356 aaKnown RBP17.29■□□□□ 0.36
CCDC61-201ENST00000536603 FANCEQ9HB96 536 aa17.29■□□□□ 0.36
CCDC61-201ENST00000536603 SYTL2Q9HCH5 934 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms