RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ZBTB2Q8N680 514 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 C19orf47Q8N9M1 422 aaKnown RBP11.97□□□□□ -0.49
PRKDC-207ENST00000536483 LMNTD1Q8N9Z9 388 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.97□□□□□ -0.49
PRKDC-207ENST00000536483 DPH2Q9BQC3 489 aaPredicted RBP11.97□□□□□ -0.49
PRKDC-207ENST00000536483 FAM167BQ9BTA0 163 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 PLAC1Q9HBJ0 212 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 FAM60AQ9NP50 221 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 PCMTD2Q9NV79 361 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 MAP10Q9P2G4 905 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 GALPQ9UBC7 116 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 ASIC3Q9UHC3 531 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 FBXO5Q9UKT4 447 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 CRYL1Q9Y2S2 319 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 TDRKHQ9Y2W6 561 aaKnown RBP11.97□□□□□ -0.49
PRKDC-207ENST00000536483 DHRS7Q9Y394 339 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 PCDHGB7Q9Y5F8 929 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 AP1M2Q9Y6Q5 423 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 TARM1B6A8C7 271 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 TMEM150CB9EJG8 249 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 GFYI3L273 518 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 DYNC1I1O14576 645 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 SEC31AO94979 1220 aaKnown RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 HBQ1P09105 142 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 CBSLP0DN79 551 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 ENO3P13929 434 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 PVRP15151 417 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 CHRM3P20309 590 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 CYP2A7P20853 494 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 CBSP35520 551 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 SLC1A2P43004 574 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 PAFAH1B1P43034 410 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 CSE1LP55060 971 aaKnown RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 DHX9Q08211 1270 aaKnown RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 CTBP1Q13363 440 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 RAPSNQ13702 412 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 ARHGAP19Q14CB8 494 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 PTCHD3Q3KNS1 767 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 MSS51Q4VC12 460 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 SPANXN3Q5MJ09 141 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 ZNF385CQ66K41 422 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 SLC6A19Q695T7 634 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 FAM198BQ6UWH4 519 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 CYHR1Q6ZMK1 362 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 SYTL1Q8IYJ3 562 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 PDIK1LQ8N165 341 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 RBMXL3Q8N7X1 1067 aaKnown RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 TMEM102Q8N9M5 508 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 C2CD4AQ8NCU7 369 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 MYRIPQ8NFW9 859 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 GSDMBQ8TAX9 411 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 DENND1AQ8TEH3 1009 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 ZUFSPQ96AP4 578 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 FOPNLQ96NB1 174 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 ZNF285Q96NJ3 590 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 SLC7A5P2Q9GIP4 190 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 KLHL25Q9H0H3 589 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 ACTR5Q9H9F9 607 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 C20orf96Q9NUD7 363 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 CUEDC1Q9NWM3 386 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 SPATA7Q9P0W8 599 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 G3BP2Q9UN86 482 aaKnown RBP11.96□□□□□ -0.49
PRKDC-207ENST00000536483 NFS1Q9Y697 457 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 MAD1L1Q9Y6D9 718 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 TEX264Q9Y6I9 313 aa11.96□□□□□ -0.49
PRKDC-207ENST00000536483 HIVEP3Q5T1R4 2406 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 E7ESA3 106 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 MYO1CO00159 1063 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 NDC80O14777 642 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 ONECUT2O95948 504 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 MPC1LP0DKB6 136 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 GABRB3P28472 473 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 HSD17B2P37059 387 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 ETF1P62495 437 aaKnown RBP11.95□□□□□ -0.5
PRKDC-207ENST00000536483 TIAL1Q01085 375 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRKDC-207ENST00000536483 ATP1A4Q13733 1029 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 NCF4Q15080 339 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 HSP90AA5PQ58FG0 334 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 ACSBG2Q5FVE4 666 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 STEAP4Q687X5 459 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 RHBDD2Q6NTF9 364 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 MED25Q71SY5 747 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 KCNMB4Q86W47 210 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 HPS6Q86YV9 775 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 IGDCC3Q8IVU1 814 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 OTUD6BQ8N6M0 293 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 GIMAP7Q8NHV1 300 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 GABPB2Q8TAK5 448 aaPredicted RBP11.95□□□□□ -0.5
PRKDC-207ENST00000536483 PRR7Q8TB68 274 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 ASB11Q8WXH4 323 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 INPP5DQ92835 1189 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 PNPLA2Q96AD5 504 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 CAPZA3Q96KX2 299 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 AARSD1Q9BTE6 412 aaKnown RBP11.95□□□□□ -0.5
PRKDC-207ENST00000536483 GPR83Q9NYM4 423 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 IL1RAPL1Q9NZN1 696 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 PLAGL1Q9UM63 463 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 MYO9AB2RTY4 2548 aa11.95□□□□□ -0.5
PRKDC-207ENST00000536483 CREBBPQ92793 2442 aa11.94□□□□□ -0.5
PRKDC-207ENST00000536483 A0A1W2PPV9 198 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms