RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 DTX1Q86Y01 620 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 SYTL1Q8IYJ3 562 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 DNAJC22Q8N4W6 341 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 OR1L3Q8NH93 324 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 MCOLN3Q8TDD5 553 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 SMPDL3AQ92484 453 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 PTERQ96BW5 349 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 TSPAN17Q96FV3 270 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 CCDC138Q96M89 665 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 B3GNT4Q9C0J1 378 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 DERL2Q9GZP9 239 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 SYTL2Q9HCH5 934 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 PDE7BQ9NP56 450 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 IGSF5Q9NSI5 407 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.21■□□□□ 0.35
DDX55-204ENST00000536079 TAC3Q9UHF0 121 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 CFAP47Q6ZTR5 3102 aa17.21■□□□□ 0.35
DDX55-204ENST00000536079 SNRNP200O75643 2136 aaKnown RBP17.21■□□□□ 0.35
DDX55-204ENST00000536079 USP24Q9UPU5 2620 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 H3BMH7 237 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 CTSVO60911 334 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 GUCA1CO95843 209 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 ALDOAP04075 364 aaKnown RBP17.2■□□□□ 0.34
DDX55-204ENST00000536079 TUBB4BP68371 445 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 ACY1Q03154 408 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 CSHL1Q14406 222 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 IL11RAQ14626 422 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 ERCC6LQ2NKX8 1250 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 TMEM164Q5U3C3 297 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 AGTRAPQ6RW13 159 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 SPACA3Q8IXA5 215 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 RAB42Q8N4Z0 105 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 SLC22A18Q96BI1 424 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 TCTN2Q96GX1 697 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 CRELD1Q96HD1 420 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 FCRL4Q96PJ5 515 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 DHRS4Q9BTZ2 278 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 ASPSCR1Q9BZE9 553 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 AKIRIN1Q9H9L7 192 aaPredicted RBP17.2■□□□□ 0.34
DDX55-204ENST00000536079 SNX15Q9NRS6 342 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 CTNNAL1Q9UBT7 734 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 PILRAQ9UKJ1 303 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 RARRES3Q9UL19 164 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 NOVA2Q9UNW9 492 aaKnown RBP17.2■□□□□ 0.34
DDX55-204ENST00000536079 PCDHB11Q9Y5F2 797 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 SDK2Q58EX2 2172 aa17.2■□□□□ 0.34
DDX55-204ENST00000536079 URB1O60287 2271 aaKnown RBP17.19■□□□□ 0.34
DDX55-204ENST00000536079 A0A087WV48 116 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 TMEM150CB9EJG8 249 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 EFSO43281 561 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 STK17BO94768 372 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 KIAA0754O94854 1291 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 DLGAP3O95886 979 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 SHBGP04278 402 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 RPA3P35244 121 aaPredicted RBP17.19■□□□□ 0.34
DDX55-204ENST00000536079 HSD17B2P37059 387 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 TBPL1P62380 186 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 ILF2Q12905 390 aaKnown RBP17.19■□□□□ 0.34
DDX55-204ENST00000536079 NAE1Q13564 534 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 PPP1R3BQ86XI6 285 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 SLC38A9Q8NBW4 561 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 ZNF248Q8NDW4 579 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 KCNE4Q8WWG9 221 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 ANKRD7Q92527 254 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 ALKBH8Q96BT7 664 aaKnown RBP17.19■□□□□ 0.34
DDX55-204ENST00000536079 PYCR2Q96C36 320 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 NXNL1Q96CM4 212 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 SPRTNQ9H040 489 aaPredicted RBP17.19■□□□□ 0.34
DDX55-204ENST00000536079 CUEDC1Q9NWM3 386 aaPredicted RBP17.19■□□□□ 0.34
DDX55-204ENST00000536079 ARL15Q9NXU5 204 aa17.19■□□□□ 0.34
DDX55-204ENST00000536079 ACACAQ13085 2346 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.18■□□□□ 0.34
DDX55-204ENST00000536079 KLK10O43240 276 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 NTRK1P04629 796 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 C2P06681 752 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 INHBAP08476 426 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 WT1P19544 449 aaPredicted RBP17.18■□□□□ 0.34
DDX55-204ENST00000536079 MSH2P43246 934 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDX55-204ENST00000536079 TMTC4Q5T4D3 741 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 ICE2Q659A1 982 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 FBXO42Q6P3S6 717 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 RAPH1Q70E73 1250 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 VASH2Q86V25 355 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 CENPLQ8N0S6 344 aaPredicted RBP17.18■□□□□ 0.34
DDX55-204ENST00000536079 OR56A3Q8NH54 315 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 KCTD4Q8WVF5 259 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 HNRNPLLQ8WVV9 542 aaKnown RBP17.18■□□□□ 0.34
DDX55-204ENST00000536079 NKD1Q969G9 470 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 FBXL8Q96CD0 374 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 MED8Q96G25 268 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 TEFMQ96QE5 360 aaKnown RBP17.18■□□□□ 0.34
DDX55-204ENST00000536079 OR4K3Q96R72 315 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 ZPBPQ9BS86 351 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 DPH7Q9BTV6 452 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 SGPP1Q9BX95 441 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 ULBP3Q9BZM4 244 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 CHRNA10Q9GZZ6 450 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 SSUH2Q9Y2M2 353 aa17.18■□□□□ 0.34
DDX55-204ENST00000536079 TMEM184BQ9Y519 407 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms