RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 FIGLAQ6QHK4 219 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 SBSNQ6UWP8 590 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 SYTL1Q8IYJ3 562 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 EIF1ADQ8N9N8 165 aaKnown RBP21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 OR1L3Q8NH93 324 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 TXLNGYQ9BZA5 131 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 FANCEQ9HB96 536 aa21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 KMT2BQ9UMN6 2715 aaPredicted RBP21.87■■□□□ 1.09
SFSWAP-204ENST00000535399 TMEM150CB9EJG8 249 aa21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 CDC7O00311 574 aa21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 STMN1P16949 149 aa21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 SRSF6Q13247 344 aaKnown RBP21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 MAP7Q14244 749 aa21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 MRRFQ96E11 262 aaKnown RBP21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 ACAT2Q9BWD1 397 aa21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 INTS7Q9NVH2 962 aaKnown RBP21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 NOVA2Q9UNW9 492 aaKnown RBP21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 DSPP15924 2871 aaKnown RBP21.86■■□□□ 1.09
SFSWAP-204ENST00000535399 TEX51A0A1B0GUA7 166 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 HMX2A2RU54 273 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 NPEPPSL1A6NEC2 478 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 TARM1B6A8C7 271 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 H3BMH7 237 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 MYBL2P10244 700 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 RPA3P35244 121 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 AP1S2P56377 157 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 RAB10P61026 200 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 TSTA3Q13630 321 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 PPP1R3AQ16821 1122 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 DEFB110Q30KQ9 67 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 PRAMEF17Q5VTA0 474 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 C19orf48Q6RUI8 117 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 GSPT2Q8IYD1 628 aaKnown RBP21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 CACNA2D3Q8IZS8 1091 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 NLGN4XQ8N0W4 816 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 NLGN4YQ8NFZ3 816 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 SLC44A1Q8WWI5 657 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 ZUFSPQ96AP4 578 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 DERL2Q9GZP9 239 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 SLC6A20Q9NP91 592 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 TAC3Q9UHF0 121 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 CACNA1BQ00975 2339 aa21.85■■□□□ 1.09
SFSWAP-204ENST00000535399 EFSO43281 561 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 ABHD2P08910 425 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 ENO2P09104 434 aaPredicted RBP21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 HIST1H2AGP0C0S8 130 aaPredicted RBP21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 HIST1H2ADP20671 130 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 CMPK1P30085 196 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 ATP1A2P50993 1020 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 ZXDCQ2QGD7 858 aaPredicted RBP21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 BROXQ5VW32 411 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 AGTRAPQ6RW13 159 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 TRMT10CQ7L0Y3 403 aaKnown RBP21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 CMC1Q7Z7K0 106 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 VASH2Q86V25 355 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 GALNT6Q8NCL4 622 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 UHMK1Q8TAS1 419 aaKnown RBP21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 HIST1H2AHQ96KK5 128 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 CCNL2Q96S94 520 aaPredicted RBP21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 HIST1H2AJQ99878 128 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 H2AFJQ9BTM1 129 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 TRIM54Q9BYV2 358 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 ANKZF1Q9H8Y5 726 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 ARL15Q9NXU5 204 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 SERTAD3Q9UJW9 196 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 PLCL2Q9UPR0 1127 aa21.84■■□□□ 1.09
SFSWAP-204ENST00000535399 PTPRQQ9UMZ3 2332 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 A0A087WUV0 522 aaPredicted RBP21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 IGKV1-8A0A0C4DH67 115 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 SCRG1O75711 98 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 NTRK1P04629 796 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 CTSBP07858 339 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 CCDC166P0CW27 439 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 TNFRSF8P28908 595 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 GMPRP36959 345 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 PMS2P54278 862 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 ITGA1P56199 1179 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 TBPL1P62380 186 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 PRDX1Q06830 199 aaKnown RBP21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 BMPR2Q13873 1038 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 TSNQ15631 228 aaKnown RBP21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 UAP1Q16222 522 aaPredicted RBP21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 MROH9Q5TGP6 573 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 ICE2Q659A1 982 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 C6orf15Q6UXA7 325 aaPredicted RBP21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 TMEM126BQ8IUX1 230 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 MCATQ8IVS2 390 aaKnown RBP21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 SPATA6LQ8N4H0 392 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 ESX1Q8N693 406 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 FBXL8Q96CD0 374 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 CRELD1Q96HD1 420 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 UBXN10Q96LJ8 280 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 UNKQ9C0B0 810 aaKnown RBP21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 MRPS30Q9NP92 439 aaKnown RBP21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 WDR70Q9NW82 654 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 CTNNAL1Q9UBT7 734 aa21.83■■□□□ 1.09
SFSWAP-204ENST00000535399 CFAP47Q6ZTR5 3102 aa21.83■■□□□ 1.08
SFSWAP-204ENST00000535399 OR2A25A4D2G3 310 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 RIPK2O43353 540 aa21.82■■□□□ 1.08
SFSWAP-204ENST00000535399 NRP2O60462 931 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms