RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 THEMIS2Q5TEJ8 643 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 FAM20CQ8IXL6 584 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 LRRC56Q8IYG6 542 aaPredicted RBP23.31■■□□□ 1.32
SIPA1-210ENST00000534406 CENPLQ8N0S6 344 aaPredicted RBP23.31■■□□□ 1.32
SIPA1-210ENST00000534406 OR2L3Q8NG85 312 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 OR2A1Q8NGT9 310 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 MDM1Q8TC05 714 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 KIAA1191Q96A73 305 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 TAAR9Q96RI9 348 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 MIPEPQ99797 713 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 DDA1Q9BW61 102 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 ACAT2Q9BWD1 397 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 CCDC86Q9H6F5 360 aaKnown RBP23.31■■□□□ 1.32
SIPA1-210ENST00000534406 PDE7BQ9NP56 450 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 DKK4Q9UBT3 224 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 TAC3Q9UHF0 121 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 TPRP12270 2363 aaKnown RBP23.31■■□□□ 1.32
SIPA1-210ENST00000534406 APC2O95996 2303 aa23.31■■□□□ 1.32
SIPA1-210ENST00000534406 CDRT15L2A8MXV6 281 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 C1QTNF9BB2RNN3 333 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 ANXA5P08758 320 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 C1QTNF9P0C862 333 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 TFEBP19484 476 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 MAGP20916 626 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 CMPK1P30085 196 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 ACY1Q03154 408 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 FOXM1Q08050 763 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 TUBB3Q13509 450 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 NAA25Q14CX7 972 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 TMEM164Q5U3C3 297 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 KLC3Q6P597 504 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 TIFABQ6ZNK6 161 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 TDRPQ86YL5 185 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 GPSM1Q86YR5 675 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 USP7Q93009 1102 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 NXNL1Q96CM4 212 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 MED8Q96G25 268 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 OR6C1Q96RD1 312 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 EGFL8Q99944 293 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 ATG10Q9H0Y0 220 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 ALG9Q9H6U8 611 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 FBXO8Q9NRD0 319 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 ABCF3Q9NUQ8 709 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 RNF112Q9ULX5 631 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 PCDHGA7Q9Y5G6 932 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 ACACAQ13085 2346 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 ACACBO00763 2458 aa23.3■■□□□ 1.32
SIPA1-210ENST00000534406 SMIM23A6NLE4 172 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 POLR1CO15160 346 aaPredicted RBP23.29■■□□□ 1.32
SIPA1-210ENST00000534406 KLHL2O95198 593 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 FOLR1P15328 257 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 CCND1P24385 295 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 SLCO1A2P46721 670 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 ERVPABLB-1P60509 514 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 NAE1Q13564 534 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 TGFBIQ15582 683 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 TBC1D25Q3MII6 688 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 PRAMEF13Q5VWM6 474 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 KIAA1614Q5VZ46 1190 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 ICE2Q659A1 982 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 CEACAM20Q6UY09 585 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 CLEC14AQ86T13 490 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 EPS8L3Q8TE67 593 aaKnown RBP23.29■■□□□ 1.32
SIPA1-210ENST00000534406 TCTN2Q96GX1 697 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 CABS1Q96KC9 395 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 ZNF578Q96N58 590 aaPredicted RBP23.29■■□□□ 1.32
SIPA1-210ENST00000534406 B3GNT4Q9C0J1 378 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 CHRNA10Q9GZZ6 450 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 PCBD2Q9H0N5 130 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 FANCEQ9HB96 536 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 TBK1Q9UHD2 729 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 PCDHGA3Q9Y5H0 932 aa23.29■■□□□ 1.32
SIPA1-210ENST00000534406 AHCTF1Q8WYP5 2266 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 ASPMQ8IZT6 3477 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 CCDC189A1A4V9 331 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 PRAMEF10O60809 474 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 KERAO60938 352 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 HNMTP50135 292 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 IFFO1Q0D2I5 559 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 RASA2Q15283 850 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 ZIC1Q15915 447 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 DCAF12Q5T6F0 453 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 CAPN13Q6MZZ7 669 aaPredicted RBP23.28■■□□□ 1.32
SIPA1-210ENST00000534406 ISCA2Q86U28 154 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 STAG3L4Q8TBR4 150 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 EXT2Q93063 718 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 PMEPA1Q969W9 287 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 TSNARE1Q96NA8 513 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 TEFMQ96QE5 360 aaKnown RBP23.28■■□□□ 1.32
SIPA1-210ENST00000534406 SGPP1Q9BX95 441 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 ASPSCR1Q9BZE9 553 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 APMAPQ9HDC9 416 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 MRPS30Q9NP92 439 aaKnown RBP23.28■■□□□ 1.32
SIPA1-210ENST00000534406 FGF21Q9NSA1 209 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 KLHL20Q9Y2M5 609 aa23.28■■□□□ 1.32
SIPA1-210ENST00000534406 TMEM8BA6NDV4 472 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 C9orf172C9J069 976 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 NVLO15381 856 aaKnown RBP23.27■■□□□ 1.32
SIPA1-210ENST00000534406 CDH16O75309 829 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 S100BP04271 92 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms