RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PHPT1Q9NRX4 125 aaPredicted RBP2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 AGPAT4Q9NRZ5 378 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 SAMSN1Q9NSI8 373 aaKnown RBP2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 EXOC1Q9NV70 894 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 C5AR2Q9P296 337 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF624Q9P2J8 865 aaPredicted RBP2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 CPNE7Q9UBL6 633 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 TRIM10Q9UDY6 481 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC23A2Q9UGH3 650 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 RARRES3Q9UL19 164 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 SNX7Q9UNH6 387 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 SMC3Q9UQE7 1217 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 TRAF3IP3Q9Y228 551 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 BTRCQ9Y297 605 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 LUC7L2Q9Y383 392 aaKnown RBP2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 COQ4Q9Y3A0 265 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 MFHAS1Q9Y4C4 1052 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 SPEF1Q9Y4P9 236 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 EPN1Q9Y6I3 576 aaPredicted RBP2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 MEGF8Q7Z7M0 2845 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 PKD1L1Q8TDX9 2849 aa2.89□□□□□ -1.95
CHMP4A-208ENST00000534106 TGP01266 2768 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TSPAN11A1L157 253 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 RASA4BC9J798 803 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 PCDH17O14917 1159 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 GPR39O43194 453 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 RASA4O43374 803 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CREB3O43889 395 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 HSF2BPO75031 334 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CNOT3O75175 753 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 SCRG1O75711 98 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 UBXN7O94888 489 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 LY6G6DO95868 133 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 IGSF6O95976 241 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 SOD1P00441 154 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 MT-ND3P03897 115 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 ANKRD34CP0C6C1 535 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CBSLP0DN79 551 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 ITGAMP11215 1152 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 ACP5P13686 325 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 AMD1P17707 334 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CTPS1P17812 591 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 NELFEP18615 380 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 LHCGRP22888 699 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CBSP35520 551 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 USP8P40818 1118 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 ACADSBP45954 432 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 ARCN1P48444 511 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CDKN1CP49918 316 aaPredicted RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 MECP2P51608 486 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TDGF1P3P51864 188 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 UBE2IP63279 158 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 RAD51Q06609 339 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 MPP3Q13368 585 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TUBB3Q13509 450 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TP53BP2Q13625 1128 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 SNTB1Q13884 538 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 STK38Q15208 465 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CEBPEQ15744 281 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 SEPT7Q16181 437 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CNGA3Q16281 694 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 ZCWPW2Q504Y3 356 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 EFHC1Q5JVL4 640 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 FAM182AQ5T1J6 154 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 C1orf189Q5VU69 101 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 MLIPQ5VWP3 458 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 IZUMO3Q5VZ72 239 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 RAET1GQ6H3X3 334 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TMEM207Q6UWW9 146 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CLEC9AQ6UXN8 241 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 GFRALQ6UXV0 394 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF783Q6ZMS7 281 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 C3P1Q6ZMU1 363 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 LINC00696Q6ZRV3 163 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TMEM26Q6ZUK4 368 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 C11orf57Q6ZUT1 292 aaPredicted RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 MED25Q71SY5 747 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 DPPA4Q7L190 304 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 DOK3Q7L591 496 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TECPR1Q7Z6L1 1165 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 SRLQ86TD4 932 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC9B2Q86UD5 537 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 GALNT13Q8IUC8 556 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TMEM126BQ8IUX1 230 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 PAF1Q8N7H5 531 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CDYL2Q8N8U2 506 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 C1orf131Q8NDD1 294 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 SIMC1Q8NDZ2 872 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 OR1N1Q8NGS0 311 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 NT5C3BQ969T7 300 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 TRIM44Q96DX7 344 aaPredicted RBP2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 NUS1Q96E22 293 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 C14orf79Q96F83 325 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 FAXDC2Q96IV6 333 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 CFAP57Q96MR6 1250 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 NT5C1BQ96P26 610 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 GBP5Q96PP8 586 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 MAP3K3Q99759 626 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 SLX1AQ9BQ83 275 aa2.88□□□□□ -1.95
CHMP4A-208ENST00000534106 DUSP26Q9BV47 211 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms