RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SYN1P17600 705 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 CXCR2P25025 360 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 PREPP48147 710 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 CDK9P50750 372 aaKnown RBP11.95□□□□□ -0.5
BDNF-218ENST00000533246 KRR1Q13601 381 aaKnown RBP11.95□□□□□ -0.5
BDNF-218ENST00000533246 KLHL12Q53G59 568 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 ASRGL1Q7L266 308 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 CHMP1BQ7LBR1 199 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 BEND7Q8N7W2 519 aaPredicted RBP11.95□□□□□ -0.5
BDNF-218ENST00000533246 KIAA1191Q96A73 305 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 FBXL20Q96IG2 436 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 MIR1-1HGQ9H1L0 117 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 SAV1Q9H4B6 383 aaPredicted RBP11.95□□□□□ -0.5
BDNF-218ENST00000533246 MAGEE1Q9HCI5 957 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 ERGIC3Q9Y282 383 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 RP1P56715 2156 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 NUP205Q92621 2012 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 FAM234BA2RU67 622 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 LCHNA4D1U4 455 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 MAGEB17A8MXT2 336 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 TNFRSF11BO00300 401 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 FMO3P31513 532 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 RYKP34925 604 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 CAPZA2P47755 286 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 CSNK2BP67870 215 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 LRRC66Q68CR7 880 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 CES5AQ6NT32 575 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 RNF44Q7L0R7 432 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 ZNF557Q8N988 423 aaPredicted RBP11.95□□□□□ -0.5
BDNF-218ENST00000533246 C11orf65Q8NCR3 313 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 SORCS1Q8WY21 1168 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 NODALQ96S42 347 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 TMEM248Q9NWD8 314 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 DUS2Q9NX74 493 aaKnown RBP11.95□□□□□ -0.5
BDNF-218ENST00000533246 ACTR3BQ9P1U1 418 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 POLHQ9Y253 713 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 NCKAP1Q9Y2A7 1128 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 Q9Y3F1 56 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 KRBA1A5PL33 1030 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 QSOX1O00391 747 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 BTN3A3O00478 584 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 OR1F1O43749 312 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 FGBP02675 491 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 HLA-EP13747 358 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 AMD1P17707 334 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 DGKGP49619 791 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 MAPK12P53778 367 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 CCDC58Q4VC31 144 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 MACC1Q6ZN28 852 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 CHSY3Q70JA7 882 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 COLGALT2Q8IYK4 626 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 SLAIN1Q8ND83 568 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 MCFD2Q8NI22 146 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 SLC45A3Q96JT2 553 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 CHCHD6Q9BRQ6 235 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 YIPF4Q9BSR8 244 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 SMURF2Q9HAU4 748 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 BTBD3Q9Y2F9 522 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 STON1Q9Y6Q2 735 aa11.95□□□□□ -0.5
BDNF-218ENST00000533246 A0A1W2PQ45 241 aaPredicted RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 A0A1W2PQY0 241 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 RAB19A4D1S5 217 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 ZNF623O75123 536 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 ADH1CP00326 375 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 IL12AP29459 219 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 DSC3Q14574 896 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 SUSD1Q6UWL2 747 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 SCD5Q86SK9 330 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 GALNT12Q8IXK2 581 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 RGL4Q8IZJ4 473 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 PIK3R3Q92569 461 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 SLC9A6Q92581 669 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 TIFAQ96CG3 184 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 CCDC120Q96HB5 630 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 C1orf21Q9H246 121 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 CHMP1AQ9HD42 196 aaPredicted RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 CLN6Q9NWW5 311 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 SUCOQ9UBS9 1254 aaKnown RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 WBP11Q9Y2W2 641 aaKnown RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 SESN1Q9Y6P5 492 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 TRPM3Q9HCF6 1732 aaPredicted RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 AZGP1P25311 298 aaKnown RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 TALDO1P37837 337 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 SEC13P55735 322 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 CAP1Q01518 475 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 GHRHRQ02643 423 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 TECRLQ5HYJ1 363 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 C6orf136Q5SQH8 315 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 ZNF648Q5T619 568 aaPredicted RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 MED27Q6P2C8 311 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 PHYKPLQ8IUZ5 450 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 CYP4Z2PQ8N1L4 340 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 C1orf52Q8N6N3 182 aaKnown RBP11.94□□□□□ -0.5
BDNF-218ENST00000533246 FAIM2Q9BWQ8 316 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 FBXW2Q9UKT8 454 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 UBR2Q8IWV8 1755 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 NWD2Q9ULI1 1742 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 GVINP1Q7Z2Y8 2422 aa11.94□□□□□ -0.5
BDNF-218ENST00000533246 MYH9P35579 1960 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms