RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 PSMB5P28074 263 aa17.07■□□□□ 0.32
PCF11-206ENST00000533018 CCNFP41002 786 aa17.07■□□□□ 0.32
PCF11-206ENST00000533018 AIMP2Q13155 320 aaKnown RBP17.07■□□□□ 0.32
PCF11-206ENST00000533018 TRIP13Q15645 432 aaPredicted RBP17.07■□□□□ 0.32
PCF11-206ENST00000533018 FAM214AQ32MH5 1076 aa17.07■□□□□ 0.32
PCF11-206ENST00000533018 CISD2Q8N5K1 135 aaKnown RBP17.07■□□□□ 0.32
PCF11-206ENST00000533018 SSC4DQ8WTU2 575 aa17.07■□□□□ 0.32
PCF11-206ENST00000533018 FKBP10Q96AY3 582 aa17.07■□□□□ 0.32
PCF11-206ENST00000533018 SNRNP40Q96DI7 357 aaKnown RBP17.07■□□□□ 0.32
PCF11-206ENST00000533018 SOX17Q9H6I2 414 aaPredicted RBP17.07■□□□□ 0.32
PCF11-206ENST00000533018 FBXL4Q9UKA2 621 aa17.07■□□□□ 0.32
PCF11-206ENST00000533018 MAU2Q9Y6X3 613 aa17.07■□□□□ 0.32
PCF11-206ENST00000533018 HIVEP3Q5T1R4 2406 aa17.07■□□□□ 0.32
PCF11-206ENST00000533018 A0A0J9YVX5 310 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 ALOX12BO75342 701 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 ALBP02768 609 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 EIF2S1P05198 315 aaKnown RBP17.06■□□□□ 0.32
PCF11-206ENST00000533018 CCDC175P0C221 793 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 ITGAXP20702 1163 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 MMP11P24347 488 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 CXCR5P32302 372 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 OR1D4P47884 311 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 GLRBP48167 497 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 VPS41P49754 854 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 TSTA3Q13630 321 aaPredicted RBP17.06■□□□□ 0.32
PCF11-206ENST00000533018 NKG7Q16617 165 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 CTSL3PQ5NE16 218 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 WASHC2DQ5SRD0 308 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 RNF187Q5TA31 235 aaPredicted RBP17.06■□□□□ 0.32
PCF11-206ENST00000533018 IRAK1BP1Q5VVH5 260 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 YOD1Q5VVQ6 348 aaPredicted RBP17.06■□□□□ 0.32
PCF11-206ENST00000533018 CASC4Q6P4E1 433 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 LRRC8BQ6P9F7 803 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 KIFC1Q9BW19 673 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 WDR54Q9H977 334 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 ZC3H7BQ9UGR2 993 aaKnown RBP17.06■□□□□ 0.32
PCF11-206ENST00000533018 CRYL1Q9Y2S2 319 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 FAM169AQ9Y6X4 670 aa17.06■□□□□ 0.32
PCF11-206ENST00000533018 HYKKA2RU49 373 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 H3BMM5 538 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 PRICKLE3O43900 615 aaPredicted RBP17.05■□□□□ 0.32
PCF11-206ENST00000533018 SRPX2O60687 465 aaPredicted RBP17.05■□□□□ 0.32
PCF11-206ENST00000533018 CTSVO60911 334 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 NIPSNAP2O75323 286 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 FKBP9O95302 570 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 ERVK-10P10266 1014 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 GCGRP47871 477 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 SARNPP82979 210 aaKnown RBP17.05■□□□□ 0.32
PCF11-206ENST00000533018 CDK16Q00536 496 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 NR6A1Q15406 480 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 RBBP7Q16576 425 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 PRAMEF13Q5VWM6 474 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 OR2L3Q8NG85 312 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 NACC2Q96BF6 587 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 BIRC8Q96P09 236 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 ACAT2Q9BWD1 397 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 MRM3Q9HC36 420 aaKnown RBP17.05■□□□□ 0.32
PCF11-206ENST00000533018 ZBTB20Q9HC78 741 aaPredicted RBP17.05■□□□□ 0.32
PCF11-206ENST00000533018 SLC6A20Q9NP91 592 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 HOMER3Q9NSC5 361 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 ASF1BQ9NVP2 202 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 IL1RAPL1Q9NZN1 696 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 CTSFQ9UBX1 484 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 PLEKHB1Q9UF11 243 aaPredicted RBP17.05■□□□□ 0.32
PCF11-206ENST00000533018 SOX13Q9UN79 622 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 TEX15Q9BXT5 2789 aa17.05■□□□□ 0.32
PCF11-206ENST00000533018 TCRBV7S3A2A0A539 114 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 E5RI56 91 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 AVILO75366 819 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 PAMP19021 973 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 TPSB2P20231 275 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 ARNTP27540 789 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 FASTKQ14296 549 aaKnown RBP17.04■□□□□ 0.32
PCF11-206ENST00000533018 TPSAB1Q15661 275 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 ANKRD20A4Q4UJ75 823 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 HIST2H2BCQ6DN03 193 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 FRMPD2BQ6IN97 320 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 IGFL3Q6UXB1 125 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 COX15Q7KZN9 410 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 PRSS58Q8IYP2 241 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 DTWD1Q8N5C7 304 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 TRIM58Q8NG06 486 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 LPGAT1Q92604 370 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 VPS50Q96JG6 964 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 TCF12Q99081 682 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 SLC26A1Q9H2B4 701 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 ZNF304Q9HCX3 659 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 SPATA7Q9P0W8 599 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 SAMD15Q9P1V8 674 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 NXT1Q9UKK6 140 aaKnown RBP17.04■□□□□ 0.32
PCF11-206ENST00000533018 COPG1Q9Y678 874 aaKnown RBP17.04■□□□□ 0.32
PCF11-206ENST00000533018 CENPEQ02224 2701 aa17.04■□□□□ 0.32
PCF11-206ENST00000533018 FITM1A5D6W6 292 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 SOCS6O14544 535 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 NRP2O60462 931 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 ESR1P03372 595 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 CMPK1P30085 196 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 SOX8P57073 446 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 OCA2Q04671 838 aa17.03■□□□□ 0.32
PCF11-206ENST00000533018 GPS1Q13098 491 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms